Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.17□□□□□ -2.6
HLA-DRAP01903 SNORA53-201ENST00000391141 249 ntBASIC-1.17□□□□□ -2.6
HLA-DRAP01903 SPINT5P-201ENST00000448174 155 ntBASIC-1.17□□□□□ -2.6
HLA-DRAP01903 MTND4LP30-201ENST00000454092 297 ntBASIC-1.17□□□□□ -2.6
HLA-DRAP01903 MTND4P17-201ENST00000470444 350 ntBASIC-1.17□□□□□ -2.6
HLA-DRAP01903 SNORA40.14-201ENST00000516543 86 ntBASIC-1.17□□□□□ -2.6
HLA-DRAP01903 SNORD116.3-201ENST00000517176 78 ntBASIC-1.17□□□□□ -2.6
HLA-DRAP01903 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.17□□□□□ -2.6
HLA-DRAP01903 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.18□□□□□ -2.6
HLA-DRAP01903 SNORD83B-201ENST00000386745 93 ntBASIC-1.18□□□□□ -2.6
HLA-DRAP01903 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.18□□□□□ -2.6
HLA-DRAP01903 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.18□□□□□ -2.6
HLA-DRAP01903 RNU7-137P-201ENST00000516788 62 ntBASIC-1.18□□□□□ -2.6
HLA-DRAP01903 AC103591.3-201ENST00000608684 209 ntBASIC-1.18□□□□□ -2.6
HLA-DRAP01903 SNORD114-10-201ENST00000363409 72 ntBASIC-1.19□□□□□ -2.6
HLA-DRAP01903 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.19□□□□□ -2.6
HLA-DRAP01903 MTATP6P23-201ENST00000440153 476 ntBASIC-1.19□□□□□ -2.6
HLA-DRAP01903 TRAJ51-201ENST00000504127 63 ntBASIC-1.19□□□□□ -2.6
HLA-DRAP01903 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.19□□□□□ -2.6
HLA-DRAP01903 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.19□□□□□ -2.6
HLA-DRAP01903 MIR548AX-201ENST00000580117 73 ntBASIC-1.19□□□□□ -2.6
HLA-DRAP01903 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.2□□□□□ -2.6
HLA-DRAP01903 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.2□□□□□ -2.6
HLA-DRAP01903 RNU4-90P-201ENST00000362773 141 ntBASIC-1.2□□□□□ -2.6
HLA-DRAP01903 SNORD113-8-201ENST00000363497 74 ntBASIC-1.2□□□□□ -2.6
HLA-DRAP01903 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.2□□□□□ -2.6
HLA-DRAP01903 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.2□□□□□ -2.6
HLA-DRAP01903 RNU6-570P-201ENST00000517051 105 ntBASIC-1.2□□□□□ -2.6
HLA-DRAP01903 AC002553.4-201ENST00000616896 331 ntBASIC-1.2□□□□□ -2.6
HLA-DRAP01903 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.21□□□□□ -2.6
HLA-DRAP01903 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.21□□□□□ -2.6
HLA-DRAP01903 RNU4-10P-201ENST00000364383 140 ntBASIC-1.21□□□□□ -2.6
HLA-DRAP01903 RNU4-16P-201ENST00000364737 141 ntBASIC-1.21□□□□□ -2.6
HLA-DRAP01903 AL731563.1-201ENST00000442202 214 ntBASIC-1.21□□□□□ -2.6
HLA-DRAP01903 SNORD67.1-201ENST00000516618 108 ntBASIC-1.21□□□□□ -2.6
HLA-DRAP01903 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.21□□□□□ -2.6
HLA-DRAP01903 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.21□□□□□ -2.6
HLA-DRAP01903 MTND5P40-201ENST00000559945 246 ntBASIC-1.21□□□□□ -2.6
HLA-DRAP01903 RNU6-901P-201ENST00000384593 106 ntBASIC-1.22□□□□□ -2.6
HLA-DRAP01903 MIR1277-201ENST00000408536 78 ntBASIC-1.22□□□□□ -2.6
HLA-DRAP01903 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.22□□□□□ -2.6
HLA-DRAP01903 SNRPGP8-201ENST00000454064 226 ntBASIC-1.22□□□□□ -2.6
HLA-DRAP01903 SNORA13-201ENST00000458790 133 ntBASIC-1.22□□□□□ -2.6
HLA-DRAP01903 snoU13.19-201ENST00000459148 104 ntBASIC-1.22□□□□□ -2.6
HLA-DRAP01903 RNU7-113P-201ENST00000459273 62 ntBASIC-1.22□□□□□ -2.6
HLA-DRAP01903 RNA5SP33-201ENST00000516687 98 ntBASIC-1.22□□□□□ -2.6
HLA-DRAP01903 SNORA20.3-201ENST00000516880 132 ntBASIC-1.22□□□□□ -2.6
HLA-DRAP01903 RNA5SP169-201ENST00000517268 117 ntBASIC-1.22□□□□□ -2.6
HLA-DRAP01903 YWHAEP2-201ENST00000580066 112 ntBASIC-1.22□□□□□ -2.6
HLA-DRAP01903 AL365205.2-201ENST00000594586 68 ntBASIC-1.22□□□□□ -2.6
HLA-DRAP01903 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.23□□□□□ -2.61
HLA-DRAP01903 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.23□□□□□ -2.61
HLA-DRAP01903 MIR539-201ENST00000365690 78 ntBASIC-1.23□□□□□ -2.61
HLA-DRAP01903 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.23□□□□□ -2.61
HLA-DRAP01903 MIR9-2-201ENST00000384838 87 ntBASIC-1.23□□□□□ -2.61
HLA-DRAP01903 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.23□□□□□ -2.61
HLA-DRAP01903 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.23□□□□□ -2.61
HLA-DRAP01903 AL445193.1-201ENST00000441183 141 ntBASIC-1.23□□□□□ -2.61
HLA-DRAP01903 HSPE1P25-201ENST00000455484 251 ntBASIC-1.23□□□□□ -2.61
HLA-DRAP01903 SCARNA17-201ENST00000516183 144 ntBASIC-1.23□□□□□ -2.61
HLA-DRAP01903 RNU6-175P-201ENST00000516896 107 ntBASIC-1.23□□□□□ -2.61
HLA-DRAP01903 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-1.23□□□□□ -2.61
HLA-DRAP01903 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.24□□□□□ -2.61
HLA-DRAP01903 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.24□□□□□ -2.61
HLA-DRAP01903 MIR519A1-201ENST00000385257 85 ntBASIC-1.24□□□□□ -2.61
HLA-DRAP01903 MIR548I2-201ENST00000408348 149 ntBASIC-1.24□□□□□ -2.61
HLA-DRAP01903 SNORD115-2-201ENST00000362842 82 ntBASIC-1.25□□□□□ -2.61
HLA-DRAP01903 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.25□□□□□ -2.61
HLA-DRAP01903 SNORD115-20-201ENST00000365099 82 ntBASIC-1.25□□□□□ -2.61
HLA-DRAP01903 SNORA32-201ENST00000384072 121 ntBASIC-1.25□□□□□ -2.61
HLA-DRAP01903 RNU6-900P-201ENST00000384498 102 ntBASIC-1.25□□□□□ -2.61
HLA-DRAP01903 HAR1A.1-201ENST00000459583 118 ntBASIC-1.25□□□□□ -2.61
HLA-DRAP01903 RNU6-559P-201ENST00000516151 98 ntBASIC-1.25□□□□□ -2.61
HLA-DRAP01903 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.25□□□□□ -2.61
HLA-DRAP01903 AC037487.3-201ENST00000606668 112 ntBASIC-1.25□□□□□ -2.61
HLA-DRAP01903 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.26□□□□□ -2.61
HLA-DRAP01903 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.26□□□□□ -2.61
HLA-DRAP01903 RNU6-154P-201ENST00000384306 106 ntBASIC-1.26□□□□□ -2.61
HLA-DRAP01903 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.26□□□□□ -2.61
HLA-DRAP01903 RNA5SP144-201ENST00000410846 116 ntBASIC-1.26□□□□□ -2.61
HLA-DRAP01903 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.26□□□□□ -2.61
HLA-DRAP01903 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.26□□□□□ -2.61
HLA-DRAP01903 MIR4500-201ENST00000579472 76 ntBASIC-1.26□□□□□ -2.61
HLA-DRAP01903 AL008718.3-201ENST00000610217 321 ntBASIC-1.26□□□□□ -2.61
HLA-DRAP01903 MIR376A1-201ENST00000616574 68 ntBASIC-1.26□□□□□ -2.61
HLA-DRAP01903 AL606534.2-204ENST00000635008 178 ntBASIC-1.26□□□□□ -2.61
HLA-DRAP01903 RNU6-845P-201ENST00000362578 103 ntBASIC-1.27□□□□□ -2.61
HLA-DRAP01903 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.27□□□□□ -2.61
HLA-DRAP01903 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.27□□□□□ -2.61
HLA-DRAP01903 SNORA79-201ENST00000408376 140 ntBASIC-1.27□□□□□ -2.61
HLA-DRAP01903 RNU6-358P-201ENST00000516564 75 ntBASIC-1.27□□□□□ -2.61
HLA-DRAP01903 SNORA25.1-201ENST00000362326 128 ntBASIC-1.28□□□□□ -2.61
HLA-DRAP01903 RNU6-502P-201ENST00000362419 108 ntBASIC-1.28□□□□□ -2.61
HLA-DRAP01903 RNU1-115P-201ENST00000365329 160 ntBASIC-1.28□□□□□ -2.61
HLA-DRAP01903 SNORD115-44-201ENST00000365391 82 ntBASIC-1.28□□□□□ -2.61
HLA-DRAP01903 RNU6-102P-201ENST00000384485 104 ntBASIC-1.28□□□□□ -2.61
HLA-DRAP01903 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.28□□□□□ -2.61
HLA-DRAP01903 MIR617-201ENST00000385030 97 ntBASIC-1.28□□□□□ -2.61
HLA-DRAP01903 RNU6-130P-201ENST00000411112 103 ntBASIC-1.28□□□□□ -2.61
HLA-DRAP01903 AC093423.1-201ENST00000440817 142 ntBASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 223.5 ms