Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ARFGEF1Q9Y6D6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.02■■□□□ 1.28
ARFGEF1Q9Y6D6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ARFGEF1Q9Y6D6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ARFGEF1Q9Y6D6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ARFGEF1Q9Y6D6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ARFGEF1Q9Y6D6 AC098831.1-202ENST00000438821 336 ntBASIC23.02■■□□□ 1.28
ARFGEF1Q9Y6D6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC23.02■■□□□ 1.28
ARFGEF1Q9Y6D6 GUSBP12-201ENST00000513727 720 ntBASIC23.02■■□□□ 1.28
ARFGEF1Q9Y6D6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC23.02■■□□□ 1.28
ARFGEF1Q9Y6D6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
ARFGEF1Q9Y6D6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
ARFGEF1Q9Y6D6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC23.02■■□□□ 1.28
ARFGEF1Q9Y6D6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
ARFGEF1Q9Y6D6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
ARFGEF1Q9Y6D6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ARFGEF1Q9Y6D6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.27
ARFGEF1Q9Y6D6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.27
ARFGEF1Q9Y6D6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ARFGEF1Q9Y6D6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ARFGEF1Q9Y6D6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC23.01■■□□□ 1.27
ARFGEF1Q9Y6D6 NMU-202ENST00000505262 693 ntTSL 3 BASIC23.01■■□□□ 1.27
ARFGEF1Q9Y6D6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC23.01■■□□□ 1.27
ARFGEF1Q9Y6D6 AL049840.3-201ENST00000602669 611 ntBASIC23.01■■□□□ 1.27
ARFGEF1Q9Y6D6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC23.01■■□□□ 1.27
ARFGEF1Q9Y6D6 AL691403.2-201ENST00000618460 490 ntBASIC23.01■■□□□ 1.27
ARFGEF1Q9Y6D6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
ARFGEF1Q9Y6D6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ARFGEF1Q9Y6D6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
ARFGEF1Q9Y6D6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ARFGEF1Q9Y6D6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ARFGEF1Q9Y6D6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ARFGEF1Q9Y6D6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC23.01■■□□□ 1.27
ARFGEF1Q9Y6D6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ARFGEF1Q9Y6D6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC23.01■■□□□ 1.27
ARFGEF1Q9Y6D6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC23.01■■□□□ 1.27
ARFGEF1Q9Y6D6 AC005332.3-201ENST00000589904 676 ntBASIC23.01■■□□□ 1.27
ARFGEF1Q9Y6D6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
ARFGEF1Q9Y6D6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
ARFGEF1Q9Y6D6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ARFGEF1Q9Y6D6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
ARFGEF1Q9Y6D6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC23■■□□□ 1.27
ARFGEF1Q9Y6D6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
ARFGEF1Q9Y6D6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ARFGEF1Q9Y6D6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ARFGEF1Q9Y6D6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC23■■□□□ 1.27
ARFGEF1Q9Y6D6 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ARFGEF1Q9Y6D6 LINC02084-201ENST00000606069 1096 ntBASIC23■■□□□ 1.27
ARFGEF1Q9Y6D6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC23■■□□□ 1.27
ARFGEF1Q9Y6D6 KRT8P3-201ENST00000519669 1449 ntBASIC23■■□□□ 1.27
ARFGEF1Q9Y6D6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ARFGEF1Q9Y6D6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC23■■□□□ 1.27
ARFGEF1Q9Y6D6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
ARFGEF1Q9Y6D6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
ARFGEF1Q9Y6D6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC23■■□□□ 1.27
ARFGEF1Q9Y6D6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ARFGEF1Q9Y6D6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ARFGEF1Q9Y6D6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ARFGEF1Q9Y6D6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC22.99■■□□□ 1.27
ARFGEF1Q9Y6D6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC22.99■■□□□ 1.27
ARFGEF1Q9Y6D6 UPF3AP3-201ENST00000420996 769 ntBASIC22.99■■□□□ 1.27
ARFGEF1Q9Y6D6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC22.99■■□□□ 1.27
ARFGEF1Q9Y6D6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC22.99■■□□□ 1.27
ARFGEF1Q9Y6D6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC22.99■■□□□ 1.27
ARFGEF1Q9Y6D6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC22.99■■□□□ 1.27
ARFGEF1Q9Y6D6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC22.99■■□□□ 1.27
ARFGEF1Q9Y6D6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC22.99■■□□□ 1.27
ARFGEF1Q9Y6D6 KRT8P7-201ENST00000533003 1432 ntBASIC22.99■■□□□ 1.27
ARFGEF1Q9Y6D6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.99■■□□□ 1.27
ARFGEF1Q9Y6D6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC22.99■■□□□ 1.27
ARFGEF1Q9Y6D6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
ARFGEF1Q9Y6D6 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 RN7SL606P-201ENST00000472779 293 ntBASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 AC027796.2-201ENST00000575326 344 ntBASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC22.98■■□□□ 1.27
ARFGEF1Q9Y6D6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms