Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00588Q9Y4M8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 AL512353.2-201ENST00000448759 1962 ntBASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 AL031133.1-201ENST00000406807 723 ntBASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 RCC2P3-201ENST00000418112 1537 ntBASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00588Q9Y4M8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 KRT18P38-201ENST00000449496 1282 ntBASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 SNX5-210ENST00000481323 562 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00588Q9Y4M8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
LINC00588Q9Y4M8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
LINC00588Q9Y4M8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
LINC00588Q9Y4M8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms