Protein–RNA interactions for Protein: Q9H7V2

SYNDIG1, Synapse differentiation-inducing gene protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1Q9H7V2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYNDIG1Q9H7V2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYNDIG1Q9H7V2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYNDIG1Q9H7V2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYNDIG1Q9H7V2 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNDIG1Q9H7V2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SYNDIG1Q9H7V2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNDIG1Q9H7V2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.41■□□□□ 0.54
SYNDIG1Q9H7V2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SYNDIG1Q9H7V2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SYNDIG1Q9H7V2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SYNDIG1Q9H7V2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SYNDIG1Q9H7V2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNDIG1Q9H7V2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.41■□□□□ 0.54
SYNDIG1Q9H7V2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNDIG1Q9H7V2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.41■□□□□ 0.54
SYNDIG1Q9H7V2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.41■□□□□ 0.54
SYNDIG1Q9H7V2 FAM86EP-206ENST00000510506 987 ntBASIC18.41■□□□□ 0.54
SYNDIG1Q9H7V2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.41■□□□□ 0.54
SYNDIG1Q9H7V2 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.41■□□□□ 0.54
SYNDIG1Q9H7V2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.41■□□□□ 0.54
SYNDIG1Q9H7V2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SYNDIG1Q9H7V2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SYNDIG1Q9H7V2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SYNDIG1Q9H7V2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNDIG1Q9H7V2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SYNDIG1Q9H7V2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNDIG1Q9H7V2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.41■□□□□ 0.54
SYNDIG1Q9H7V2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 AC112907.2-201ENST00000448639 330 ntBASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SYNDIG1Q9H7V2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
SYNDIG1Q9H7V2 AC018445.3-201ENST00000624177 1945 ntBASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 HCG4P8-203ENST00000443049 980 ntBASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 AL121894.2-201ENST00000602977 491 ntBASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 AC005332.1-201ENST00000577698 1310 ntBASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNDIG1Q9H7V2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNDIG1Q9H7V2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNDIG1Q9H7V2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.38■□□□□ 0.53
SYNDIG1Q9H7V2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SYNDIG1Q9H7V2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms