Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXC2Q99958 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXC2Q99958 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.86■□□□□ 0.13
FOXC2Q99958 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.86■□□□□ 0.13
FOXC2Q99958 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.86■□□□□ 0.13
FOXC2Q99958 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXC2Q99958 IGHV3-41-201ENST00000613121 348 ntBASIC15.86■□□□□ 0.13
FOXC2Q99958 AL773604.1-201ENST00000617417 272 ntBASIC15.86■□□□□ 0.13
FOXC2Q99958 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXC2Q99958 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
FOXC2Q99958 AC092667.1-201ENST00000434301 2586 ntBASIC15.86■□□□□ 0.13
FOXC2Q99958 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXC2Q99958 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXC2Q99958 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXC2Q99958 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
FOXC2Q99958 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.86■□□□□ 0.13
FOXC2Q99958 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXC2Q99958 GPAT2P1-201ENST00000444924 1672 ntBASIC15.86■□□□□ 0.13
FOXC2Q99958 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXC2Q99958 FEM1AP1-201ENST00000431297 1995 ntBASIC15.86■□□□□ 0.13
FOXC2Q99958 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXC2Q99958 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FOXC2Q99958 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXC2Q99958 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXC2Q99958 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FOXC2Q99958 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXC2Q99958 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXC2Q99958 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FOXC2Q99958 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC15.85■□□□□ 0.13
FOXC2Q99958 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
FOXC2Q99958 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXC2Q99958 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.85■□□□□ 0.13
FOXC2Q99958 AC036111.1-201ENST00000533973 1582 ntBASIC15.85■□□□□ 0.13
FOXC2Q99958 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXC2Q99958 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
FOXC2Q99958 AKR1C7P-201ENST00000305623 895 ntBASIC15.85■□□□□ 0.13
FOXC2Q99958 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.85■□□□□ 0.13
FOXC2Q99958 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.85■□□□□ 0.13
FOXC2Q99958 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
FOXC2Q99958 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.85■□□□□ 0.13
FOXC2Q99958 MIR3180-5-201ENST00000583743 153 ntBASIC15.85■□□□□ 0.13
FOXC2Q99958 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.85■□□□□ 0.13
FOXC2Q99958 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.85■□□□□ 0.13
FOXC2Q99958 REXO1L6P-202ENST00000619970 1078 ntBASIC15.85■□□□□ 0.13
FOXC2Q99958 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
FOXC2Q99958 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXC2Q99958 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.85■□□□□ 0.13
FOXC2Q99958 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.85■□□□□ 0.13
FOXC2Q99958 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXC2Q99958 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FOXC2Q99958 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FOXC2Q99958 AC233702.3-201ENST00000578656 1387 ntBASIC15.85■□□□□ 0.13
FOXC2Q99958 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC15.85■□□□□ 0.13
FOXC2Q99958 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC15.85■□□□□ 0.13
FOXC2Q99958 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXC2Q99958 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXC2Q99958 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
FOXC2Q99958 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FOXC2Q99958 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXC2Q99958 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXC2Q99958 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FOXC2Q99958 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXC2Q99958 Z83836.1-201ENST00000624605 1642 ntBASIC15.84■□□□□ 0.13
FOXC2Q99958 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.84■□□□□ 0.13
FOXC2Q99958 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
FOXC2Q99958 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.84■□□□□ 0.13
FOXC2Q99958 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.84■□□□□ 0.13
FOXC2Q99958 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FOXC2Q99958 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXC2Q99958 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXC2Q99958 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
FOXC2Q99958 RNA5SP419-201ENST00000515908 135 ntBASIC15.84■□□□□ 0.13
FOXC2Q99958 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
FOXC2Q99958 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.84■□□□□ 0.13
FOXC2Q99958 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.84■□□□□ 0.13
FOXC2Q99958 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.84■□□□□ 0.13
FOXC2Q99958 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.84■□□□□ 0.13
FOXC2Q99958 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.84■□□□□ 0.13
FOXC2Q99958 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.84■□□□□ 0.13
FOXC2Q99958 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.84■□□□□ 0.13
FOXC2Q99958 AC112497.1-201ENST00000624824 639 ntBASIC15.84■□□□□ 0.13
FOXC2Q99958 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC15.84■□□□□ 0.13
FOXC2Q99958 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXC2Q99958 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
FOXC2Q99958 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.84■□□□□ 0.13
FOXC2Q99958 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXC2Q99958 LINC00167-201ENST00000530583 1419 ntBASIC15.84■□□□□ 0.13
FOXC2Q99958 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
FOXC2Q99958 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FOXC2Q99958 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXC2Q99958 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FOXC2Q99958 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
FOXC2Q99958 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.83■□□□□ 0.13
FOXC2Q99958 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
FOXC2Q99958 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.83■□□□□ 0.13
FOXC2Q99958 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
FOXC2Q99958 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
FOXC2Q99958 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
FOXC2Q99958 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
FOXC2Q99958 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms