Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
ABCA3Q99758 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ABCA3Q99758 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ABCA3Q99758 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
ABCA3Q99758 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC25.12■■□□□ 1.61
ABCA3Q99758 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
ABCA3Q99758 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
ABCA3Q99758 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC25.12■■□□□ 1.61
ABCA3Q99758 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ABCA3Q99758 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC25.12■■□□□ 1.61
ABCA3Q99758 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
ABCA3Q99758 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
ABCA3Q99758 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
ABCA3Q99758 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ABCA3Q99758 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
ABCA3Q99758 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
ABCA3Q99758 AF186996.4-201ENST00000467186 377 ntBASIC25.12■■□□□ 1.61
ABCA3Q99758 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC25.12■■□□□ 1.61
ABCA3Q99758 PAM16-208ENST00000573553 722 ntTSL 2 BASIC25.12■■□□□ 1.61
ABCA3Q99758 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC25.12■■□□□ 1.61
ABCA3Q99758 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC25.12■■□□□ 1.61
ABCA3Q99758 AC064862.7-201ENST00000604520 867 ntBASIC25.12■■□□□ 1.61
ABCA3Q99758 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC25.12■■□□□ 1.61
ABCA3Q99758 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC25.12■■□□□ 1.61
ABCA3Q99758 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC25.12■■□□□ 1.61
ABCA3Q99758 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC25.12■■□□□ 1.61
ABCA3Q99758 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
ABCA3Q99758 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC25.11■■□□□ 1.61
ABCA3Q99758 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ABCA3Q99758 TEX21P-204ENST00000641479 1693 ntBASIC25.11■■□□□ 1.61
ABCA3Q99758 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ABCA3Q99758 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
ABCA3Q99758 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
ABCA3Q99758 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC25.11■■□□□ 1.61
ABCA3Q99758 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
ABCA3Q99758 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC25.11■■□□□ 1.61
ABCA3Q99758 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC25.11■■□□□ 1.61
ABCA3Q99758 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC25.11■■□□□ 1.61
ABCA3Q99758 AC010327.4-202ENST00000591484 748 ntBASIC25.11■■□□□ 1.61
ABCA3Q99758 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
ABCA3Q99758 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
ABCA3Q99758 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
ABCA3Q99758 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC25.11■■□□□ 1.61
ABCA3Q99758 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC25.11■■□□□ 1.61
ABCA3Q99758 TCF3P1-201ENST00000423021 1937 ntBASIC25.1■■□□□ 1.61
ABCA3Q99758 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ABCA3Q99758 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ABCA3Q99758 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC25.1■■□□□ 1.61
ABCA3Q99758 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC25.1■■□□□ 1.61
ABCA3Q99758 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
ABCA3Q99758 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC25.1■■□□□ 1.61
ABCA3Q99758 AC024563.2-201ENST00000603282 481 ntBASIC25.1■■□□□ 1.61
ABCA3Q99758 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
ABCA3Q99758 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
ABCA3Q99758 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
ABCA3Q99758 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ABCA3Q99758 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ABCA3Q99758 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC25.09■■□□□ 1.61
ABCA3Q99758 GUSBP12-201ENST00000513727 720 ntBASIC25.09■■□□□ 1.61
ABCA3Q99758 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC25.09■■□□□ 1.61
ABCA3Q99758 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
ABCA3Q99758 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ABCA3Q99758 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ABCA3Q99758 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
ABCA3Q99758 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
ABCA3Q99758 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC25.09■■□□□ 1.61
ABCA3Q99758 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC25.09■■□□□ 1.61
ABCA3Q99758 IGHV3-22-201ENST00000520721 359 ntBASIC25.09■■□□□ 1.61
ABCA3Q99758 TERC-201ENST00000602385 541 ntBASIC25.09■■□□□ 1.61
ABCA3Q99758 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC25.09■■□□□ 1.61
ABCA3Q99758 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
ABCA3Q99758 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ABCA3Q99758 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
ABCA3Q99758 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC25.08■■□□□ 1.61
ABCA3Q99758 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
ABCA3Q99758 AL512353.2-201ENST00000448759 1962 ntBASIC25.08■■□□□ 1.61
ABCA3Q99758 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ABCA3Q99758 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ABCA3Q99758 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
ABCA3Q99758 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
ABCA3Q99758 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC25.08■■□□□ 1.61
ABCA3Q99758 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
ABCA3Q99758 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
ABCA3Q99758 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC25.07■■□□□ 1.6
ABCA3Q99758 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC25.07■■□□□ 1.6
ABCA3Q99758 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ABCA3Q99758 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ABCA3Q99758 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ABCA3Q99758 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ABCA3Q99758 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC25.07■■□□□ 1.6
ABCA3Q99758 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ABCA3Q99758 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
ABCA3Q99758 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC25.06■■□□□ 1.6
ABCA3Q99758 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ABCA3Q99758 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ABCA3Q99758 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
ABCA3Q99758 FGFR3P6-201ENST00000457012 610 ntBASIC25.06■■□□□ 1.6
ABCA3Q99758 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC25.06■■□□□ 1.6
ABCA3Q99758 PIN1-206ENST00000587625 878 ntTSL 2 BASIC25.06■■□□□ 1.6
ABCA3Q99758 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms