Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
CNTNAP3BQ96NU0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNTNAP3BQ96NU0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CNTNAP3BQ96NU0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CNTNAP3BQ96NU0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CNTNAP3BQ96NU0 AC104109.2-201ENST00000602919 1418 ntBASIC17.99■□□□□ 0.47
CNTNAP3BQ96NU0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CNTNAP3BQ96NU0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
CNTNAP3BQ96NU0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNTNAP3BQ96NU0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.99■□□□□ 0.47
CNTNAP3BQ96NU0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.99■□□□□ 0.47
CNTNAP3BQ96NU0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.99■□□□□ 0.47
CNTNAP3BQ96NU0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CNTNAP3BQ96NU0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.99■□□□□ 0.47
CNTNAP3BQ96NU0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.99■□□□□ 0.47
CNTNAP3BQ96NU0 SEC1P-202ENST00000473944 940 ntBASIC17.99■□□□□ 0.47
CNTNAP3BQ96NU0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.99■□□□□ 0.47
CNTNAP3BQ96NU0 IGHV3-22-201ENST00000520721 359 ntBASIC17.99■□□□□ 0.47
CNTNAP3BQ96NU0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CNTNAP3BQ96NU0 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.99■□□□□ 0.47
CNTNAP3BQ96NU0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.99■□□□□ 0.47
CNTNAP3BQ96NU0 AC116407.3-201ENST00000623905 1129 ntBASIC17.99■□□□□ 0.47
CNTNAP3BQ96NU0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNTNAP3BQ96NU0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNTNAP3BQ96NU0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CNTNAP3BQ96NU0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNTNAP3BQ96NU0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CNTNAP3BQ96NU0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNTNAP3BQ96NU0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CNTNAP3BQ96NU0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNTNAP3BQ96NU0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.98■□□□□ 0.47
CNTNAP3BQ96NU0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNTNAP3BQ96NU0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.98■□□□□ 0.47
CNTNAP3BQ96NU0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CNTNAP3BQ96NU0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CNTNAP3BQ96NU0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.98■□□□□ 0.47
CNTNAP3BQ96NU0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNTNAP3BQ96NU0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNTNAP3BQ96NU0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CNTNAP3BQ96NU0 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.98■□□□□ 0.47
CNTNAP3BQ96NU0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.98■□□□□ 0.47
CNTNAP3BQ96NU0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.98■□□□□ 0.47
CNTNAP3BQ96NU0 AC079602.3-201ENST00000623931 403 ntBASIC17.98■□□□□ 0.47
CNTNAP3BQ96NU0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.98■□□□□ 0.47
CNTNAP3BQ96NU0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
CNTNAP3BQ96NU0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNTNAP3BQ96NU0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.98■□□□□ 0.47
CNTNAP3BQ96NU0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CNTNAP3BQ96NU0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CNTNAP3BQ96NU0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CNTNAP3BQ96NU0 MIR662-201ENST00000384847 95 ntBASIC17.97■□□□□ 0.47
CNTNAP3BQ96NU0 IGHV3-47-201ENST00000425060 335 ntBASIC17.97■□□□□ 0.47
CNTNAP3BQ96NU0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.97■□□□□ 0.47
CNTNAP3BQ96NU0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNTNAP3BQ96NU0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CNTNAP3BQ96NU0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.97■□□□□ 0.47
CNTNAP3BQ96NU0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.97■□□□□ 0.47
CNTNAP3BQ96NU0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.97■□□□□ 0.47
CNTNAP3BQ96NU0 IGHV3-41-201ENST00000613121 348 ntBASIC17.97■□□□□ 0.47
CNTNAP3BQ96NU0 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.97■□□□□ 0.47
CNTNAP3BQ96NU0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CNTNAP3BQ96NU0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNTNAP3BQ96NU0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.97■□□□□ 0.47
CNTNAP3BQ96NU0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CNTNAP3BQ96NU0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 HLA-F-220ENST00000434407 884 ntBASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 AC018712.1-201ENST00000455767 687 ntBASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 AC024243.1-201ENST00000609234 778 ntBASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 AL355877.3-201ENST00000622820 899 ntBASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 FAM215A-202ENST00000632077 792 ntBASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 AC244015.2-201ENST00000616358 1861 ntBASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
CNTNAP3BQ96NU0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms