Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.02■□□□□ 0.8
ZNF558Q96NG5 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.02■□□□□ 0.8
ZNF558Q96NG5 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
ZNF558Q96NG5 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF558Q96NG5 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF558Q96NG5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF558Q96NG5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.02■□□□□ 0.8
ZNF558Q96NG5 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF558Q96NG5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF558Q96NG5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ZNF558Q96NG5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
ZNF558Q96NG5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 DRAXINP1-201ENST00000437611 948 ntBASIC20.01■□□□□ 0.79
ZNF558Q96NG5 LINC00265-3P-201ENST00000447588 903 ntBASIC20.01■□□□□ 0.79
ZNF558Q96NG5 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 TPSP2-201ENST00000561760 610 ntBASIC20.01■□□□□ 0.79
ZNF558Q96NG5 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.01■□□□□ 0.79
ZNF558Q96NG5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF558Q96NG5 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20■□□□□ 0.79
ZNF558Q96NG5 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20■□□□□ 0.79
ZNF558Q96NG5 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF558Q96NG5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ZNF558Q96NG5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF558Q96NG5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ZNF558Q96NG5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20■□□□□ 0.79
ZNF558Q96NG5 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ZNF558Q96NG5 MIR564-202ENST00000385049 94 ntBASIC20■□□□□ 0.79
ZNF558Q96NG5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20■□□□□ 0.79
ZNF558Q96NG5 AP000867.3-201ENST00000524675 377 ntBASIC20■□□□□ 0.79
ZNF558Q96NG5 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20■□□□□ 0.79
ZNF558Q96NG5 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ZNF558Q96NG5 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF558Q96NG5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ZNF558Q96NG5 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZNF558Q96NG5 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF558Q96NG5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20■□□□□ 0.79
ZNF558Q96NG5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF558Q96NG5 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF558Q96NG5 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20■□□□□ 0.79
ZNF558Q96NG5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF558Q96NG5 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF558Q96NG5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.99■□□□□ 0.79
ZNF558Q96NG5 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF558Q96NG5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF558Q96NG5 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF558Q96NG5 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF558Q96NG5 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF558Q96NG5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF558Q96NG5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF558Q96NG5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF558Q96NG5 TREX1-205ENST00000625293 1783 ntBASIC19.99■□□□□ 0.79
ZNF558Q96NG5 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF558Q96NG5 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF558Q96NG5 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF558Q96NG5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF558Q96NG5 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ZNF558Q96NG5 FDX1P1-201ENST00000449115 551 ntBASIC19.99■□□□□ 0.79
ZNF558Q96NG5 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.99■□□□□ 0.79
ZNF558Q96NG5 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.99■□□□□ 0.79
ZNF558Q96NG5 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF558Q96NG5 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.99■□□□□ 0.79
ZNF558Q96NG5 IFNL4P1-201ENST00000607083 540 ntBASIC19.99■□□□□ 0.79
ZNF558Q96NG5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF558Q96NG5 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.99■□□□□ 0.79
ZNF558Q96NG5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF558Q96NG5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF558Q96NG5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
ZNF558Q96NG5 Z83836.1-201ENST00000624605 1642 ntBASIC19.98■□□□□ 0.79
ZNF558Q96NG5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF558Q96NG5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF558Q96NG5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
ZNF558Q96NG5 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF558Q96NG5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF558Q96NG5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF558Q96NG5 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.98■□□□□ 0.79
ZNF558Q96NG5 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms