Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT9Q92600 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT9Q92600 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT9Q92600 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CNOT9Q92600 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT9Q92600 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CNOT9Q92600 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.38■□□□□ 0.37
CNOT9Q92600 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CNOT9Q92600 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CNOT9Q92600 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.38■□□□□ 0.37
CNOT9Q92600 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.38■□□□□ 0.37
CNOT9Q92600 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT9Q92600 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CNOT9Q92600 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT9Q92600 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT9Q92600 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT9Q92600 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT9Q92600 UBE2SP1-201ENST00000450587 669 ntBASIC17.38■□□□□ 0.37
CNOT9Q92600 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.38■□□□□ 0.37
CNOT9Q92600 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT9Q92600 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CNOT9Q92600 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.38■□□□□ 0.37
CNOT9Q92600 AC130371.2-201ENST00000619443 611 ntBASIC17.38■□□□□ 0.37
CNOT9Q92600 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.38■□□□□ 0.37
CNOT9Q92600 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.38■□□□□ 0.37
CNOT9Q92600 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.38■□□□□ 0.37
CNOT9Q92600 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.38■□□□□ 0.37
CNOT9Q92600 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT9Q92600 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.38■□□□□ 0.37
CNOT9Q92600 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT9Q92600 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT9Q92600 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT9Q92600 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT9Q92600 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT9Q92600 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT9Q92600 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.38■□□□□ 0.37
CNOT9Q92600 AL135905.2-201ENST00000584934 1404 ntBASIC17.38■□□□□ 0.37
CNOT9Q92600 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.38■□□□□ 0.37
CNOT9Q92600 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT9Q92600 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.37■□□□□ 0.37
CNOT9Q92600 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CNOT9Q92600 AC020763.4-201ENST00000623414 4170 ntBASIC17.37■□□□□ 0.37
CNOT9Q92600 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT9Q92600 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.37■□□□□ 0.37
CNOT9Q92600 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT9Q92600 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CNOT9Q92600 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.37■□□□□ 0.37
CNOT9Q92600 B3GAT3P1-201ENST00000471720 806 ntBASIC17.37■□□□□ 0.37
CNOT9Q92600 PRSS44-201ENST00000515154 1146 ntBASIC17.37■□□□□ 0.37
CNOT9Q92600 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.37■□□□□ 0.37
CNOT9Q92600 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.37■□□□□ 0.37
CNOT9Q92600 CD177P1-201ENST00000606252 935 ntBASIC17.37■□□□□ 0.37
CNOT9Q92600 MIR6786-201ENST00000616843 113 ntBASIC17.37■□□□□ 0.37
CNOT9Q92600 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CNOT9Q92600 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CNOT9Q92600 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.37■□□□□ 0.37
CNOT9Q92600 Z98044.1-201ENST00000632503 1764 ntBASIC17.37■□□□□ 0.37
CNOT9Q92600 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT9Q92600 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT9Q92600 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.37■□□□□ 0.37
CNOT9Q92600 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.37■□□□□ 0.37
CNOT9Q92600 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT9Q92600 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT9Q92600 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.36■□□□□ 0.37
CNOT9Q92600 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT9Q92600 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
CNOT9Q92600 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.36■□□□□ 0.37
CNOT9Q92600 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT9Q92600 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT9Q92600 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT9Q92600 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.36■□□□□ 0.37
CNOT9Q92600 RPS2P55-201ENST00000397318 883 ntBASIC17.36■□□□□ 0.37
CNOT9Q92600 MESTP1-201ENST00000404287 994 ntBASIC17.36■□□□□ 0.37
CNOT9Q92600 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT9Q92600 AC107956.1-201ENST00000494359 873 ntBASIC17.36■□□□□ 0.37
CNOT9Q92600 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.36■□□□□ 0.37
CNOT9Q92600 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.36■□□□□ 0.37
CNOT9Q92600 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.36■□□□□ 0.37
CNOT9Q92600 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.36■□□□□ 0.37
CNOT9Q92600 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT9Q92600 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT9Q92600 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT9Q92600 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.36■□□□□ 0.37
CNOT9Q92600 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT9Q92600 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.36■□□□□ 0.37
CNOT9Q92600 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT9Q92600 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT9Q92600 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.36■□□□□ 0.37
CNOT9Q92600 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT9Q92600 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT9Q92600 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT9Q92600 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT9Q92600 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT9Q92600 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT9Q92600 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
CNOT9Q92600 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CNOT9Q92600 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CNOT9Q92600 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.35■□□□□ 0.37
CNOT9Q92600 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNOT9Q92600 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms