Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RTF1Q92541 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RTF1Q92541 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RTF1Q92541 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC24.61■■□□□ 1.53
RTF1Q92541 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RTF1Q92541 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC24.61■■□□□ 1.53
RTF1Q92541 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC24.61■■□□□ 1.53
RTF1Q92541 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
RTF1Q92541 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RTF1Q92541 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
RTF1Q92541 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RTF1Q92541 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RTF1Q92541 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC24.61■■□□□ 1.53
RTF1Q92541 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RTF1Q92541 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
RTF1Q92541 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC24.6■■□□□ 1.53
RTF1Q92541 AL109659.2-201ENST00000606809 1674 ntBASIC24.6■■□□□ 1.53
RTF1Q92541 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RTF1Q92541 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC24.6■■□□□ 1.53
RTF1Q92541 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
RTF1Q92541 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RTF1Q92541 CD81-212ENST00000526072 1172 ntTSL 5 BASIC24.6■■□□□ 1.53
RTF1Q92541 AL358472.4-201ENST00000633140 710 ntBASIC24.6■■□□□ 1.53
RTF1Q92541 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RTF1Q92541 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
RTF1Q92541 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RTF1Q92541 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RTF1Q92541 AC112907.2-201ENST00000448639 330 ntBASIC24.59■■□□□ 1.53
RTF1Q92541 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC24.59■■□□□ 1.53
RTF1Q92541 AC024243.1-201ENST00000609234 778 ntBASIC24.59■■□□□ 1.53
RTF1Q92541 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC24.59■■□□□ 1.53
RTF1Q92541 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RTF1Q92541 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RTF1Q92541 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC24.59■■□□□ 1.53
RTF1Q92541 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
RTF1Q92541 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RTF1Q92541 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
RTF1Q92541 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
RTF1Q92541 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC24.58■■□□□ 1.53
RTF1Q92541 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
RTF1Q92541 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC24.58■■□□□ 1.53
RTF1Q92541 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
RTF1Q92541 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RTF1Q92541 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC24.58■■□□□ 1.53
RTF1Q92541 AC008556.1-201ENST00000610908 2040 ntBASIC24.58■■□□□ 1.53
RTF1Q92541 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RTF1Q92541 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RTF1Q92541 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC24.58■■□□□ 1.53
RTF1Q92541 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC24.58■■□□□ 1.53
RTF1Q92541 CD320-202ENST00000537716 1119 ntTSL 2 BASIC24.58■■□□□ 1.53
RTF1Q92541 AC091076.1-201ENST00000610741 619 ntBASIC24.58■■□□□ 1.53
RTF1Q92541 AL121956.5-201ENST00000625261 221 ntBASIC24.58■■□□□ 1.53
RTF1Q92541 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC24.58■■□□□ 1.53
RTF1Q92541 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RTF1Q92541 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.52
RTF1Q92541 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RTF1Q92541 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
RTF1Q92541 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC24.57■■□□□ 1.52
RTF1Q92541 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RTF1Q92541 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RTF1Q92541 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
RTF1Q92541 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
RTF1Q92541 SLC25A24-204ENST00000569674 2357 ntBASIC24.57■■□□□ 1.52
RTF1Q92541 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC24.57■■□□□ 1.52
RTF1Q92541 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RTF1Q92541 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RTF1Q92541 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
RTF1Q92541 GRAMD4P1-201ENST00000435181 1110 ntBASIC24.57■■□□□ 1.52
RTF1Q92541 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC24.57■■□□□ 1.52
RTF1Q92541 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
RTF1Q92541 KRT8P32-201ENST00000512863 1461 ntBASIC24.57■■□□□ 1.52
RTF1Q92541 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
RTF1Q92541 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RTF1Q92541 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RTF1Q92541 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RTF1Q92541 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RTF1Q92541 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC24.56■■□□□ 1.52
RTF1Q92541 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC24.56■■□□□ 1.52
RTF1Q92541 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC24.56■■□□□ 1.52
RTF1Q92541 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RTF1Q92541 ENSA-205ENST00000361532 792 ntTSL 2 BASIC24.56■■□□□ 1.52
RTF1Q92541 SPDYE15P-201ENST00000424157 909 ntBASIC24.56■■□□□ 1.52
RTF1Q92541 AC034232.1-201ENST00000506026 1064 ntBASIC24.56■■□□□ 1.52
RTF1Q92541 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
RTF1Q92541 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC24.56■■□□□ 1.52
RTF1Q92541 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
RTF1Q92541 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RTF1Q92541 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC24.56■■□□□ 1.52
RTF1Q92541 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RTF1Q92541 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTF1Q92541 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC24.55■■□□□ 1.52
RTF1Q92541 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTF1Q92541 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
RTF1Q92541 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RTF1Q92541 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTF1Q92541 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RTF1Q92541 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTF1Q92541 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RTF1Q92541 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RTF1Q92541 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC24.55■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms