Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC23.23■■□□□ 1.31
RTL9Q8NET4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RTL9Q8NET4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC23.23■■□□□ 1.31
RTL9Q8NET4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC23.23■■□□□ 1.31
RTL9Q8NET4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC23.23■■□□□ 1.31
RTL9Q8NET4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC23.23■■□□□ 1.31
RTL9Q8NET4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RTL9Q8NET4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
RTL9Q8NET4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RTL9Q8NET4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
RTL9Q8NET4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RTL9Q8NET4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.23■■□□□ 1.31
RTL9Q8NET4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC23.23■■□□□ 1.31
RTL9Q8NET4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
RTL9Q8NET4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTL9Q8NET4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
RTL9Q8NET4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTL9Q8NET4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC23.22■■□□□ 1.31
RTL9Q8NET4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.22■■□□□ 1.31
RTL9Q8NET4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTL9Q8NET4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTL9Q8NET4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTL9Q8NET4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTL9Q8NET4 MIR564-202ENST00000385049 94 ntBASIC23.22■■□□□ 1.31
RTL9Q8NET4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC23.22■■□□□ 1.31
RTL9Q8NET4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RTL9Q8NET4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC23.22■■□□□ 1.31
RTL9Q8NET4 AC104390.1-201ENST00000555663 520 ntBASIC23.22■■□□□ 1.31
RTL9Q8NET4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC23.22■■□□□ 1.31
RTL9Q8NET4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
RTL9Q8NET4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTL9Q8NET4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTL9Q8NET4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTL9Q8NET4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC23.22■■□□□ 1.31
RTL9Q8NET4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTL9Q8NET4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTL9Q8NET4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTL9Q8NET4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTL9Q8NET4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
RTL9Q8NET4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC23.21■■□□□ 1.31
RTL9Q8NET4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC23.21■■□□□ 1.31
RTL9Q8NET4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
RTL9Q8NET4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.21■■□□□ 1.31
RTL9Q8NET4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RTL9Q8NET4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RTL9Q8NET4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC23.21■■□□□ 1.31
RTL9Q8NET4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RTL9Q8NET4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RTL9Q8NET4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RTL9Q8NET4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC23.21■■□□□ 1.31
RTL9Q8NET4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
RTL9Q8NET4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
RTL9Q8NET4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC23.21■■□□□ 1.31
RTL9Q8NET4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC23.21■■□□□ 1.31
RTL9Q8NET4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RTL9Q8NET4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RTL9Q8NET4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RTL9Q8NET4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RTL9Q8NET4 BID-204ENST00000399767 2129 ntTSL 2 BASIC23.21■■□□□ 1.31
RTL9Q8NET4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC23.21■■□□□ 1.31
RTL9Q8NET4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.31
RTL9Q8NET4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC23.2■■□□□ 1.31
RTL9Q8NET4 AC093525.10-201ENST00000625130 1569 ntBASIC23.2■■□□□ 1.3
RTL9Q8NET4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
RTL9Q8NET4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RTL9Q8NET4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RTL9Q8NET4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC23.2■■□□□ 1.3
RTL9Q8NET4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC23.2■■□□□ 1.3
RTL9Q8NET4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
RTL9Q8NET4 AL136038.4-201ENST00000603606 1261 ntBASIC23.2■■□□□ 1.3
RTL9Q8NET4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RTL9Q8NET4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC23.2■■□□□ 1.3
RTL9Q8NET4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RTL9Q8NET4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC23.2■■□□□ 1.3
RTL9Q8NET4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC23.2■■□□□ 1.3
RTL9Q8NET4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
RTL9Q8NET4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC23.2■■□□□ 1.3
RTL9Q8NET4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTL9Q8NET4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTL9Q8NET4 KRT18P23-201ENST00000435622 1283 ntBASIC23.19■■□□□ 1.3
RTL9Q8NET4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
RTL9Q8NET4 AC010240.3-201ENST00000607688 395 ntBASIC23.19■■□□□ 1.3
RTL9Q8NET4 AC068587.9-201ENST00000641814 219 ntBASIC23.19■■□□□ 1.3
RTL9Q8NET4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RTL9Q8NET4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RTL9Q8NET4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.19■■□□□ 1.3
RTL9Q8NET4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
RTL9Q8NET4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC23.19■■□□□ 1.3
RTL9Q8NET4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RTL9Q8NET4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC23.19■■□□□ 1.3
RTL9Q8NET4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTL9Q8NET4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
RTL9Q8NET4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RTL9Q8NET4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC23.18■■□□□ 1.3
RTL9Q8NET4 MIR662-201ENST00000384847 95 ntBASIC23.18■■□□□ 1.3
RTL9Q8NET4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC23.18■■□□□ 1.3
RTL9Q8NET4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC23.18■■□□□ 1.3
RTL9Q8NET4 AC092119.3-201ENST00000612618 583 ntBASIC23.18■■□□□ 1.3
RTL9Q8NET4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RTL9Q8NET4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms