Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
SCN4BQ8IWT1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCN4BQ8IWT1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SCN4BQ8IWT1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCN4BQ8IWT1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SCN4BQ8IWT1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SCN4BQ8IWT1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCN4BQ8IWT1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SCN4BQ8IWT1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.89■□□□□ 0.77
SCN4BQ8IWT1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.89■□□□□ 0.77
SCN4BQ8IWT1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SCN4BQ8IWT1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.89■□□□□ 0.77
SCN4BQ8IWT1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SCN4BQ8IWT1 AC036111.1-201ENST00000533973 1582 ntBASIC19.89■□□□□ 0.77
SCN4BQ8IWT1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCN4BQ8IWT1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
SCN4BQ8IWT1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SCN4BQ8IWT1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.89■□□□□ 0.77
SCN4BQ8IWT1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCN4BQ8IWT1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.89■□□□□ 0.77
SCN4BQ8IWT1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 AP000523.1-201ENST00000398242 1049 ntBASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 FP475955.4-201ENST00000623131 1990 ntBASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 AC138932.1-201ENST00000534164 6830 ntBASIC19.88■□□□□ 0.77
SCN4BQ8IWT1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCN4BQ8IWT1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.87■□□□□ 0.77
SCN4BQ8IWT1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.87■□□□□ 0.77
SCN4BQ8IWT1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SCN4BQ8IWT1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCN4BQ8IWT1 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SCN4BQ8IWT1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCN4BQ8IWT1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.87■□□□□ 0.77
SCN4BQ8IWT1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SCN4BQ8IWT1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.87■□□□□ 0.77
SCN4BQ8IWT1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SCN4BQ8IWT1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCN4BQ8IWT1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.87■□□□□ 0.77
SCN4BQ8IWT1 AL359075.1-203ENST00000462729 1002 ntBASIC19.87■□□□□ 0.77
SCN4BQ8IWT1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.87■□□□□ 0.77
SCN4BQ8IWT1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCN4BQ8IWT1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
SCN4BQ8IWT1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SCN4BQ8IWT1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCN4BQ8IWT1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCN4BQ8IWT1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCN4BQ8IWT1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.87■□□□□ 0.77
SCN4BQ8IWT1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCN4BQ8IWT1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCN4BQ8IWT1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCN4BQ8IWT1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN4BQ8IWT1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.86■□□□□ 0.77
SCN4BQ8IWT1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN4BQ8IWT1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.86■□□□□ 0.77
SCN4BQ8IWT1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SCN4BQ8IWT1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN4BQ8IWT1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN4BQ8IWT1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN4BQ8IWT1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN4BQ8IWT1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.86■□□□□ 0.77
SCN4BQ8IWT1 FAM8A6P-201ENST00000407496 1135 ntBASIC19.86■□□□□ 0.77
SCN4BQ8IWT1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.86■□□□□ 0.77
SCN4BQ8IWT1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.86■□□□□ 0.77
SCN4BQ8IWT1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.86■□□□□ 0.77
SCN4BQ8IWT1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.86■□□□□ 0.77
SCN4BQ8IWT1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.86■□□□□ 0.77
SCN4BQ8IWT1 NEK4P2-201ENST00000580004 1012 ntBASIC19.86■□□□□ 0.77
SCN4BQ8IWT1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SCN4BQ8IWT1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SCN4BQ8IWT1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN4BQ8IWT1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCN4BQ8IWT1 RCC2P3-201ENST00000418112 1537 ntBASIC19.86■□□□□ 0.77
SCN4BQ8IWT1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms