Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 PGAM5P1-201ENST00000518923 814 ntBASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 AL353801.3-201ENST00000609898 542 ntBASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 KRT8P26-201ENST00000534154 1276 ntBASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 MIR3917-201ENST00000580971 93 ntBASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 CLDN5-201ENST00000403084 2357 ntBASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 AL023284.2-201ENST00000405850 579 ntBASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 IGHV3-47-201ENST00000425060 335 ntBASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 MIR940-201ENST00000401276 94 ntBASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
VPS13BQ7Z7G8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 DRAXINP1-201ENST00000437611 948 ntBASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 AL590627.1-203ENST00000421194 1026 ntBASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 AL773604.1-201ENST00000617417 272 ntBASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 FICD-205ENST00000552758 603 ntTSL 2 BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
VPS13BQ7Z7G8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 TEX21P-204ENST00000641479 1693 ntBASIC11.61□□□□□ -0.55
VPS13BQ7Z7G8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms