Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 AC093787.1-201ENST00000450396 207 ntBASIC16.41■□□□□ 0.22
C11orf88Q6PI97 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 RNA5SP413-201ENST00000516373 109 ntBASIC16.41■□□□□ 0.22
C11orf88Q6PI97 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 AC012313.1-201ENST00000593393 3059 ntBASIC16.41■□□□□ 0.22
C11orf88Q6PI97 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 NOC2LP2-201ENST00000407594 1944 ntBASIC16.41■□□□□ 0.22
C11orf88Q6PI97 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
C11orf88Q6PI97 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.41■□□□□ 0.22
C11orf88Q6PI97 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 ITM2C-210ENST00000620962 501 ntBASIC16.4■□□□□ 0.22
C11orf88Q6PI97 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 AC006333.2-201ENST00000607957 2099 ntBASIC16.4■□□□□ 0.22
C11orf88Q6PI97 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
C11orf88Q6PI97 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
C11orf88Q6PI97 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 AL161938.1-201ENST00000569833 2180 ntBASIC16.39■□□□□ 0.21
C11orf88Q6PI97 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 KRT18P29-201ENST00000397031 1267 ntBASIC16.39■□□□□ 0.21
C11orf88Q6PI97 LSM12P1-201ENST00000411836 588 ntBASIC16.39■□□□□ 0.21
C11orf88Q6PI97 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 MYC-209ENST00000641252 345 ntBASIC16.39■□□□□ 0.21
C11orf88Q6PI97 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 NOC2LP1-202ENST00000452600 2235 ntBASIC16.39■□□□□ 0.21
C11orf88Q6PI97 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.39■□□□□ 0.21
C11orf88Q6PI97 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
C11orf88Q6PI97 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms