Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RNF213Q63HN8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC10.05□□□□□ -0.8
RNF213Q63HN8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC10.05□□□□□ -0.8
RNF213Q63HN8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC10.05□□□□□ -0.8
RNF213Q63HN8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC10.05□□□□□ -0.8
RNF213Q63HN8 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC10.05□□□□□ -0.8
RNF213Q63HN8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC10.05□□□□□ -0.8
RNF213Q63HN8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC10.05□□□□□ -0.8
RNF213Q63HN8 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC10.05□□□□□ -0.8
RNF213Q63HN8 CCND1-203ENST00000536559 553 ntTSL 3 BASIC10.05□□□□□ -0.8
RNF213Q63HN8 RN7SL204P-201ENST00000582831 262 ntBASIC10.05□□□□□ -0.8
RNF213Q63HN8 AC114341.1-201ENST00000618070 349 ntBASIC10.05□□□□□ -0.8
RNF213Q63HN8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC10.05□□□□□ -0.8
RNF213Q63HN8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RNF213Q63HN8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC10.05□□□□□ -0.8
RNF213Q63HN8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RNF213Q63HN8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RNF213Q63HN8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC10.05□□□□□ -0.8
RNF213Q63HN8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
RNF213Q63HN8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RNF213Q63HN8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RNF213Q63HN8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RNF213Q63HN8 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC10.05□□□□□ -0.8
RNF213Q63HN8 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC10.05□□□□□ -0.8
RNF213Q63HN8 AC008761.3-201ENST00000624803 892 ntBASIC10.05□□□□□ -0.8
RNF213Q63HN8 ELL2P1-201ENST00000413990 1906 ntBASIC10.05□□□□□ -0.8
RNF213Q63HN8 KRT8P11-201ENST00000409686 1436 ntBASIC10.05□□□□□ -0.8
RNF213Q63HN8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
RNF213Q63HN8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RNF213Q63HN8 AC002310.6-201ENST00000624451 1377 ntBASIC10.05□□□□□ -0.8
RNF213Q63HN8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC10.05□□□□□ -0.8
RNF213Q63HN8 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RNF213Q63HN8 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
RNF213Q63HN8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
RNF213Q63HN8 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
RNF213Q63HN8 OR7E14P-202ENST00000530490 1290 ntBASIC10.05□□□□□ -0.8
RNF213Q63HN8 AL160286.2-201ENST00000567150 934 ntBASIC10.05□□□□□ -0.8
RNF213Q63HN8 AC092865.6-201ENST00000642101 219 ntBASIC10.05□□□□□ -0.8
RNF213Q63HN8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
RNF213Q63HN8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RNF213Q63HN8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RNF213Q63HN8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
RNF213Q63HN8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RNF213Q63HN8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RNF213Q63HN8 NUS1P2-201ENST00000417358 873 ntBASIC10.04□□□□□ -0.8
RNF213Q63HN8 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC10.04□□□□□ -0.8
RNF213Q63HN8 GRAMD4P1-201ENST00000435181 1110 ntBASIC10.04□□□□□ -0.8
RNF213Q63HN8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC10.04□□□□□ -0.8
RNF213Q63HN8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC10.04□□□□□ -0.8
RNF213Q63HN8 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC10.04□□□□□ -0.8
RNF213Q63HN8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC10.04□□□□□ -0.8
RNF213Q63HN8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
RNF213Q63HN8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RNF213Q63HN8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
RNF213Q63HN8 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC10.04□□□□□ -0.8
RNF213Q63HN8 RNA5SP421-201ENST00000516864 134 ntBASIC10.04□□□□□ -0.8
RNF213Q63HN8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC10.04□□□□□ -0.8
RNF213Q63HN8 KRT8P3-201ENST00000519669 1449 ntBASIC10.04□□□□□ -0.8
RNF213Q63HN8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
RNF213Q63HN8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
RNF213Q63HN8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RNF213Q63HN8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
RNF213Q63HN8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RNF213Q63HN8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RNF213Q63HN8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
RNF213Q63HN8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RNF213Q63HN8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC10.04□□□□□ -0.8
RNF213Q63HN8 MIR661-201ENST00000384842 89 ntBASIC10.04□□□□□ -0.8
RNF213Q63HN8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC10.04□□□□□ -0.8
RNF213Q63HN8 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC10.04□□□□□ -0.8
RNF213Q63HN8 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC10.04□□□□□ -0.8
RNF213Q63HN8 MIR4525-201ENST00000580000 75 ntBASIC10.04□□□□□ -0.8
RNF213Q63HN8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
RNF213Q63HN8 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC10.04□□□□□ -0.8
RNF213Q63HN8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC10.04□□□□□ -0.8
RNF213Q63HN8 AC109322.1-201ENST00000524499 1264 ntBASIC10.04□□□□□ -0.8
RNF213Q63HN8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RNF213Q63HN8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC10.03□□□□□ -0.8
RNF213Q63HN8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RNF213Q63HN8 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC10.03□□□□□ -0.8
RNF213Q63HN8 RBM17P3-201ENST00000417687 1192 ntBASIC10.03□□□□□ -0.8
RNF213Q63HN8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
RNF213Q63HN8 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC10.03□□□□□ -0.8
RNF213Q63HN8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RNF213Q63HN8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC10.03□□□□□ -0.8
RNF213Q63HN8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RNF213Q63HN8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RNF213Q63HN8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC10.03□□□□□ -0.8
RNF213Q63HN8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
RNF213Q63HN8 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RNF213Q63HN8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
RNF213Q63HN8 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
RNF213Q63HN8 PMS2P4-201ENST00000412466 1052 ntBASIC10.03□□□□□ -0.8
RNF213Q63HN8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC10.03□□□□□ -0.8
RNF213Q63HN8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC10.03□□□□□ -0.8
RNF213Q63HN8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC10.03□□□□□ -0.8
RNF213Q63HN8 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RNF213Q63HN8 DUX4L27-201ENST00000554796 1261 ntBASIC10.03□□□□□ -0.8
RNF213Q63HN8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC10.03□□□□□ -0.8
RNF213Q63HN8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms