Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
IRX4P78413 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.58■□□□□ 0.72
IRX4P78413 EGLN1P1-201ENST00000531623 762 ntBASIC19.58■□□□□ 0.72
IRX4P78413 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
IRX4P78413 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.58■□□□□ 0.72
IRX4P78413 AL358472.4-201ENST00000633140 710 ntBASIC19.58■□□□□ 0.72
IRX4P78413 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IRX4P78413 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IRX4P78413 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
IRX4P78413 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.58■□□□□ 0.72
IRX4P78413 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
IRX4P78413 KRT8P20-201ENST00000423953 1409 ntBASIC19.58■□□□□ 0.72
IRX4P78413 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.58■□□□□ 0.72
IRX4P78413 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
IRX4P78413 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.58■□□□□ 0.72
IRX4P78413 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.57■□□□□ 0.72
IRX4P78413 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.57■□□□□ 0.72
IRX4P78413 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.57■□□□□ 0.72
IRX4P78413 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
IRX4P78413 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX4P78413 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.57■□□□□ 0.72
IRX4P78413 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.57■□□□□ 0.72
IRX4P78413 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.57■□□□□ 0.72
IRX4P78413 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX4P78413 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX4P78413 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX4P78413 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX4P78413 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX4P78413 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
IRX4P78413 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX4P78413 AK4P3-201ENST00000418260 669 ntBASIC19.57■□□□□ 0.72
IRX4P78413 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX4P78413 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.57■□□□□ 0.72
IRX4P78413 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.57■□□□□ 0.72
IRX4P78413 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
IRX4P78413 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
IRX4P78413 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
IRX4P78413 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.57■□□□□ 0.72
IRX4P78413 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX4P78413 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
IRX4P78413 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX4P78413 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX4P78413 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.57■□□□□ 0.72
IRX4P78413 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IRX4P78413 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IRX4P78413 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IRX4P78413 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IRX4P78413 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.56■□□□□ 0.72
IRX4P78413 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
IRX4P78413 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IRX4P78413 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IRX4P78413 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
IRX4P78413 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IRX4P78413 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IRX4P78413 TSPY14P-201ENST00000303979 915 ntBASIC19.56■□□□□ 0.72
IRX4P78413 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.56■□□□□ 0.72
IRX4P78413 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.56■□□□□ 0.72
IRX4P78413 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.56■□□□□ 0.72
IRX4P78413 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
IRX4P78413 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.56■□□□□ 0.72
IRX4P78413 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.56■□□□□ 0.72
IRX4P78413 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.56■□□□□ 0.72
IRX4P78413 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
IRX4P78413 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.56■□□□□ 0.72
IRX4P78413 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IRX4P78413 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.56■□□□□ 0.72
IRX4P78413 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IRX4P78413 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.56■□□□□ 0.72
IRX4P78413 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
IRX4P78413 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.56■□□□□ 0.72
IRX4P78413 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
IRX4P78413 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
IRX4P78413 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.56■□□□□ 0.72
IRX4P78413 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
IRX4P78413 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IRX4P78413 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
IRX4P78413 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IRX4P78413 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
IRX4P78413 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
IRX4P78413 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
IRX4P78413 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
IRX4P78413 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IRX4P78413 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
IRX4P78413 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
IRX4P78413 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IRX4P78413 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
IRX4P78413 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.55■□□□□ 0.72
IRX4P78413 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.55■□□□□ 0.72
IRX4P78413 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
IRX4P78413 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.55■□□□□ 0.72
IRX4P78413 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
IRX4P78413 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
IRX4P78413 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.55■□□□□ 0.72
IRX4P78413 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.55■□□□□ 0.72
IRX4P78413 AC091076.1-201ENST00000610741 619 ntBASIC19.55■□□□□ 0.72
IRX4P78413 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.55■□□□□ 0.72
IRX4P78413 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.55■□□□□ 0.72
IRX4P78413 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IRX4P78413 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
IRX4P78413 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms