Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPAP53621 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPAP53621 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.43■□□□□ 0.7
COPAP53621 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPAP53621 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPAP53621 CKBP1-201ENST00000565489 1086 ntBASIC19.43■□□□□ 0.7
COPAP53621 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
COPAP53621 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.43■□□□□ 0.7
COPAP53621 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
COPAP53621 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.43■□□□□ 0.7
COPAP53621 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPAP53621 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COPAP53621 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPAP53621 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
COPAP53621 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
COPAP53621 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPAP53621 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
COPAP53621 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COPAP53621 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.42■□□□□ 0.7
COPAP53621 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
COPAP53621 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPAP53621 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
COPAP53621 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPAP53621 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPAP53621 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COPAP53621 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPAP53621 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.42■□□□□ 0.7
COPAP53621 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.42■□□□□ 0.7
COPAP53621 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.42■□□□□ 0.7
COPAP53621 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
COPAP53621 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COPAP53621 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.42■□□□□ 0.7
COPAP53621 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.42■□□□□ 0.7
COPAP53621 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.42■□□□□ 0.7
COPAP53621 TSPY17P-201ENST00000450329 467 ntBASIC19.42■□□□□ 0.7
COPAP53621 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.42■□□□□ 0.7
COPAP53621 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.42■□□□□ 0.7
COPAP53621 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COPAP53621 AL353719.1-201ENST00000566847 864 ntBASIC19.42■□□□□ 0.7
COPAP53621 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.42■□□□□ 0.7
COPAP53621 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.42■□□□□ 0.7
COPAP53621 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COPAP53621 NEFHP1-201ENST00000412845 2629 ntBASIC19.42■□□□□ 0.7
COPAP53621 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.42■□□□□ 0.7
COPAP53621 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
COPAP53621 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPAP53621 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
COPAP53621 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPAP53621 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPAP53621 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.42■□□□□ 0.7
COPAP53621 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COPAP53621 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPAP53621 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPAP53621 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPAP53621 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.41■□□□□ 0.7
COPAP53621 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
COPAP53621 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COPAP53621 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPAP53621 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
COPAP53621 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COPAP53621 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
COPAP53621 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COPAP53621 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPAP53621 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.41■□□□□ 0.7
COPAP53621 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPAP53621 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPAP53621 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.41■□□□□ 0.7
COPAP53621 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPAP53621 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPAP53621 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.41■□□□□ 0.7
COPAP53621 CA15P1-201ENST00000481698 905 ntBASIC19.41■□□□□ 0.7
COPAP53621 AC063952.2-201ENST00000498792 1227 ntBASIC19.41■□□□□ 0.7
COPAP53621 AC022616.7-201ENST00000525383 220 ntBASIC19.41■□□□□ 0.7
COPAP53621 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.41■□□□□ 0.7
COPAP53621 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COPAP53621 AC087388.1-201ENST00000571370 1112 ntBASIC19.41■□□□□ 0.7
COPAP53621 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.41■□□□□ 0.7
COPAP53621 AC139887.4-201ENST00000607877 719 ntBASIC19.41■□□□□ 0.7
COPAP53621 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COPAP53621 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPAP53621 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COPAP53621 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COPAP53621 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPAP53621 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPAP53621 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
COPAP53621 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.41■□□□□ 0.7
COPAP53621 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPAP53621 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COPAP53621 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COPAP53621 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.41■□□□□ 0.7
COPAP53621 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COPAP53621 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COPAP53621 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.4■□□□□ 0.7
COPAP53621 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPAP53621 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.4■□□□□ 0.7
COPAP53621 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPAP53621 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPAP53621 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COPAP53621 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.4■□□□□ 0.7
COPAP53621 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms