Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A2P16615 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ATP2A2P16615 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ATP2A2P16615 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.81■□□□□ 0.92
ATP2A2P16615 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ATP2A2P16615 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.81■□□□□ 0.92
ATP2A2P16615 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ATP2A2P16615 CR769767.2-201ENST00000622735 460 ntBASIC20.81■□□□□ 0.92
ATP2A2P16615 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A2P16615 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ATP2A2P16615 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A2P16615 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A2P16615 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A2P16615 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A2P16615 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP2A2P16615 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
ATP2A2P16615 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ATP2A2P16615 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ATP2A2P16615 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A2P16615 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A2P16615 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A2P16615 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A2P16615 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A2P16615 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP2A2P16615 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A2P16615 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A2P16615 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A2P16615 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A2P16615 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP2A2P16615 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A2P16615 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A2P16615 HBZP1-201ENST00000354915 429 ntBASIC20.8■□□□□ 0.92
ATP2A2P16615 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ATP2A2P16615 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A2P16615 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A2P16615 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A2P16615 FAAHP1-202ENST00000446499 1238 ntBASIC20.8■□□□□ 0.92
ATP2A2P16615 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A2P16615 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A2P16615 AFG3L1P-217ENST00000557444 2447 ntBASIC20.8■□□□□ 0.92
ATP2A2P16615 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.8■□□□□ 0.92
ATP2A2P16615 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A2P16615 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.8■□□□□ 0.92
ATP2A2P16615 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.8■□□□□ 0.92
ATP2A2P16615 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A2P16615 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ATP2A2P16615 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP2A2P16615 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP2A2P16615 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A2P16615 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP2A2P16615 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP2A2P16615 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A2P16615 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A2P16615 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A2P16615 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A2P16615 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.79■□□□□ 0.92
ATP2A2P16615 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.79■□□□□ 0.92
ATP2A2P16615 KRT8P10-201ENST00000450021 1447 ntBASIC20.79■□□□□ 0.92
ATP2A2P16615 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.79■□□□□ 0.92
ATP2A2P16615 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
ATP2A2P16615 AC099778.1-201ENST00000568593 1911 ntBASIC20.79■□□□□ 0.92
ATP2A2P16615 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A2P16615 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A2P16615 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A2P16615 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.79■□□□□ 0.92
ATP2A2P16615 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.79■□□□□ 0.92
ATP2A2P16615 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A2P16615 KRT17P6-201ENST00000453795 1220 ntBASIC20.79■□□□□ 0.92
ATP2A2P16615 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.79■□□□□ 0.92
ATP2A2P16615 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.79■□□□□ 0.92
ATP2A2P16615 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.79■□□□□ 0.92
ATP2A2P16615 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.79■□□□□ 0.92
ATP2A2P16615 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A2P16615 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A2P16615 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A2P16615 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.79■□□□□ 0.92
ATP2A2P16615 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A2P16615 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
ATP2A2P16615 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.79■□□□□ 0.92
ATP2A2P16615 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.79■□□□□ 0.92
ATP2A2P16615 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A2P16615 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A2P16615 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A2P16615 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A2P16615 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A2P16615 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A2P16615 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.78■□□□□ 0.92
ATP2A2P16615 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A2P16615 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A2P16615 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A2P16615 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A2P16615 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ATP2A2P16615 TSSC2-201ENST00000450217 709 ntBASIC20.78■□□□□ 0.92
ATP2A2P16615 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
ATP2A2P16615 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
ATP2A2P16615 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ATP2A2P16615 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
ATP2A2P16615 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.78■□□□□ 0.92
ATP2A2P16615 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.78■□□□□ 0.92
ATP2A2P16615 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms