Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
CFTRP13569 PGAM5P1-201ENST00000518923 814 ntBASIC32.32■■■□□ 2.76
CFTRP13569 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
CFTRP13569 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
CFTRP13569 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC32.32■■■□□ 2.76
CFTRP13569 AC024563.2-201ENST00000603282 481 ntBASIC32.32■■■□□ 2.76
CFTRP13569 AC114341.1-201ENST00000618070 349 ntBASIC32.32■■■□□ 2.76
CFTRP13569 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
CFTRP13569 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
CFTRP13569 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
CFTRP13569 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC32.31■■■□□ 2.76
CFTRP13569 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC32.31■■■□□ 2.76
CFTRP13569 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC32.31■■■□□ 2.76
CFTRP13569 AF186996.4-201ENST00000467186 377 ntBASIC32.31■■■□□ 2.76
CFTRP13569 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC32.31■■■□□ 2.76
CFTRP13569 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
CFTRP13569 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
CFTRP13569 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CFTRP13569 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC32.31■■■□□ 2.76
CFTRP13569 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC32.31■■■□□ 2.76
CFTRP13569 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CFTRP13569 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
CFTRP13569 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC32.31■■■□□ 2.76
CFTRP13569 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CFTRP13569 CCS-201ENST00000310190 942 ntTSL 5 BASIC32.3■■■□□ 2.76
CFTRP13569 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CFTRP13569 POM121L3P-201ENST00000419331 1163 ntBASIC32.3■■■□□ 2.76
CFTRP13569 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
CFTRP13569 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC32.3■■■□□ 2.76
CFTRP13569 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CFTRP13569 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CFTRP13569 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC32.3■■■□□ 2.76
CFTRP13569 FABP5-202ENST00000396359 986 ntTSL 5 BASIC32.29■■■□□ 2.76
CFTRP13569 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC32.29■■■□□ 2.76
CFTRP13569 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC32.29■■■□□ 2.76
CFTRP13569 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC32.29■■■□□ 2.76
CFTRP13569 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CFTRP13569 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC32.29■■■□□ 2.76
CFTRP13569 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CFTRP13569 AL353692.3-201ENST00000407031 1396 ntBASIC32.29■■■□□ 2.76
CFTRP13569 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
CFTRP13569 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CFTRP13569 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CFTRP13569 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CFTRP13569 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CFTRP13569 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
CFTRP13569 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CFTRP13569 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC32.29■■■□□ 2.76
CFTRP13569 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CFTRP13569 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CFTRP13569 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CFTRP13569 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC32.29■■■□□ 2.76
CFTRP13569 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC32.29■■■□□ 2.76
CFTRP13569 LITAF-211ENST00000572255 516 ntTSL 4 BASIC32.29■■■□□ 2.76
CFTRP13569 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC32.29■■■□□ 2.76
CFTRP13569 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC32.29■■■□□ 2.76
CFTRP13569 AC008608.2-201ENST00000606089 416 ntBASIC32.29■■■□□ 2.76
CFTRP13569 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
CFTRP13569 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
CFTRP13569 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC32.28■■■□□ 2.76
CFTRP13569 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CFTRP13569 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC32.28■■■□□ 2.76
CFTRP13569 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
CFTRP13569 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CFTRP13569 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC32.28■■■□□ 2.76
CFTRP13569 PIN1-206ENST00000587625 878 ntTSL 2 BASIC32.28■■■□□ 2.76
CFTRP13569 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC32.28■■■□□ 2.76
CFTRP13569 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
CFTRP13569 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
CFTRP13569 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC32.27■■■□□ 2.76
CFTRP13569 TEX21P-204ENST00000641479 1693 ntBASIC32.27■■■□□ 2.76
CFTRP13569 PMS2P7-201ENST00000506558 1336 ntBASIC32.27■■■□□ 2.76
CFTRP13569 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
CFTRP13569 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC32.27■■■□□ 2.76
CFTRP13569 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
CFTRP13569 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC32.27■■■□□ 2.76
CFTRP13569 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC32.27■■■□□ 2.76
CFTRP13569 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC32.27■■■□□ 2.76
CFTRP13569 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
CFTRP13569 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC32.27■■■□□ 2.76
CFTRP13569 AC139887.3-201ENST00000568585 713 ntBASIC32.27■■■□□ 2.76
CFTRP13569 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC32.27■■■□□ 2.76
CFTRP13569 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
CFTRP13569 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC32.27■■■□□ 2.76
CFTRP13569 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC32.27■■■□□ 2.76
CFTRP13569 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC32.26■■■□□ 2.76
CFTRP13569 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
CFTRP13569 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
CFTRP13569 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC32.26■■■□□ 2.76
CFTRP13569 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC32.26■■■□□ 2.76
CFTRP13569 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC32.26■■■□□ 2.76
CFTRP13569 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
CFTRP13569 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
CFTRP13569 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
CFTRP13569 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
CFTRP13569 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC32.26■■■□□ 2.75
CFTRP13569 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC32.26■■■□□ 2.75
CFTRP13569 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
CFTRP13569 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC32.26■■■□□ 2.75
CFTRP13569 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC32.26■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms