Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AL445675.2-201ENST00000620291 557 ntBASIC18.38■□□□□ 0.53
PCNAP12004 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCNAP12004 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PCNAP12004 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.38■□□□□ 0.53
PCNAP12004 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCNAP12004 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.38■□□□□ 0.53
PCNAP12004 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PCNAP12004 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCNAP12004 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.37■□□□□ 0.53
PCNAP12004 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.37■□□□□ 0.53
PCNAP12004 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
PCNAP12004 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PCNAP12004 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCNAP12004 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCNAP12004 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.37■□□□□ 0.53
PCNAP12004 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.37■□□□□ 0.53
PCNAP12004 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCNAP12004 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCNAP12004 AL353807.1-201ENST00000427475 662 ntBASIC18.37■□□□□ 0.53
PCNAP12004 TSPY21P-201ENST00000433481 731 ntBASIC18.37■□□□□ 0.53
PCNAP12004 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCNAP12004 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCNAP12004 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.37■□□□□ 0.53
PCNAP12004 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.37■□□□□ 0.53
PCNAP12004 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.37■□□□□ 0.53
PCNAP12004 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.37■□□□□ 0.53
PCNAP12004 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.37■□□□□ 0.53
PCNAP12004 CR392000.1-201ENST00000624770 1228 ntBASIC18.37■□□□□ 0.53
PCNAP12004 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCNAP12004 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCNAP12004 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCNAP12004 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCNAP12004 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.37■□□□□ 0.53
PCNAP12004 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.37■□□□□ 0.53
PCNAP12004 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCNAP12004 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCNAP12004 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCNAP12004 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.37■□□□□ 0.53
PCNAP12004 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCNAP12004 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.37■□□□□ 0.53
PCNAP12004 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCNAP12004 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCNAP12004 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCNAP12004 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCNAP12004 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCNAP12004 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.36■□□□□ 0.53
PCNAP12004 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCNAP12004 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCNAP12004 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
PCNAP12004 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCNAP12004 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.36■□□□□ 0.53
PCNAP12004 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCNAP12004 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PCNAP12004 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.36■□□□□ 0.53
PCNAP12004 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCNAP12004 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.36■□□□□ 0.53
PCNAP12004 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PCNAP12004 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.36■□□□□ 0.53
PCNAP12004 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.36■□□□□ 0.53
PCNAP12004 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.36■□□□□ 0.53
PCNAP12004 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCNAP12004 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
PCNAP12004 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.36■□□□□ 0.53
PCNAP12004 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PCNAP12004 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCNAP12004 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCNAP12004 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.35■□□□□ 0.53
PCNAP12004 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCNAP12004 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCNAP12004 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
PCNAP12004 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCNAP12004 CROCCP3-202ENST00000420820 1947 ntBASIC18.35■□□□□ 0.53
PCNAP12004 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PCNAP12004 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCNAP12004 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCNAP12004 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCNAP12004 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PCNAP12004 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCNAP12004 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCNAP12004 FEM1AP3-201ENST00000403722 1741 ntBASIC18.35■□□□□ 0.53
PCNAP12004 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCNAP12004 KRT8P41-201ENST00000533985 1514 ntBASIC18.35■□□□□ 0.53
PCNAP12004 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCNAP12004 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCNAP12004 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PCNAP12004 AC005332.8-201ENST00000622750 2735 ntBASIC18.35■□□□□ 0.53
PCNAP12004 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCNAP12004 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCNAP12004 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCNAP12004 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCNAP12004 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.35■□□□□ 0.53
PCNAP12004 TSPY23P-201ENST00000440136 739 ntBASIC18.35■□□□□ 0.53
PCNAP12004 KSR1P1-201ENST00000446298 240 ntBASIC18.35■□□□□ 0.53
PCNAP12004 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.35■□□□□ 0.53
PCNAP12004 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCNAP12004 AC098590.1-201ENST00000468126 897 ntBASIC18.35■□□□□ 0.53
PCNAP12004 Z85996.1-201ENST00000494644 937 ntBASIC18.35■□□□□ 0.53
PCNAP12004 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.35■□□□□ 0.53
PCNAP12004 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.35■□□□□ 0.53
PCNAP12004 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms