Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD28P10747 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD28P10747 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CD28P10747 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.74□□□□□ -0.05
CD28P10747 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD28P10747 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD28P10747 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD28P10747 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD28P10747 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.74□□□□□ -0.05
CD28P10747 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD28P10747 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD28P10747 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD28P10747 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.74□□□□□ -0.05
CD28P10747 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.74□□□□□ -0.05
CD28P10747 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.74□□□□□ -0.05
CD28P10747 VENTXP5-201ENST00000523979 775 ntBASIC14.74□□□□□ -0.05
CD28P10747 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.74□□□□□ -0.05
CD28P10747 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD28P10747 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
CD28P10747 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.74□□□□□ -0.05
CD28P10747 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.74□□□□□ -0.05
CD28P10747 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.74□□□□□ -0.05
CD28P10747 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CD28P10747 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.74□□□□□ -0.05
CD28P10747 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD28P10747 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC14.74□□□□□ -0.05
CD28P10747 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD28P10747 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD28P10747 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD28P10747 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CD28P10747 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.74□□□□□ -0.05
CD28P10747 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD28P10747 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD28P10747 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.74□□□□□ -0.05
CD28P10747 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
CD28P10747 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
CD28P10747 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD28P10747 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD28P10747 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD28P10747 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CD28P10747 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CD28P10747 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
CD28P10747 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.73□□□□□ -0.05
CD28P10747 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.73□□□□□ -0.05
CD28P10747 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.73□□□□□ -0.05
CD28P10747 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
CD28P10747 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.73□□□□□ -0.05
CD28P10747 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD28P10747 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD28P10747 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.73□□□□□ -0.05
CD28P10747 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.73□□□□□ -0.05
CD28P10747 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CD28P10747 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.73□□□□□ -0.05
CD28P10747 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
CD28P10747 KRT18P56-201ENST00000507275 550 ntBASIC14.73□□□□□ -0.05
CD28P10747 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.73□□□□□ -0.05
CD28P10747 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.73□□□□□ -0.05
CD28P10747 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CD28P10747 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD28P10747 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD28P10747 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CD28P10747 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CD28P10747 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CD28P10747 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
CD28P10747 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC14.73□□□□□ -0.05
CD28P10747 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CD28P10747 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CD28P10747 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.73□□□□□ -0.05
CD28P10747 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CD28P10747 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CD28P10747 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CD28P10747 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD28P10747 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD28P10747 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CD28P10747 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
CD28P10747 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CD28P10747 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD28P10747 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.72□□□□□ -0.05
CD28P10747 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD28P10747 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD28P10747 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD28P10747 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD28P10747 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CD28P10747 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD28P10747 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD28P10747 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD28P10747 STARP1-201ENST00000397973 869 ntBASIC14.72□□□□□ -0.05
CD28P10747 SPDYE15P-201ENST00000424157 909 ntBASIC14.72□□□□□ -0.05
CD28P10747 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD28P10747 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CD28P10747 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD28P10747 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CD28P10747 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.72□□□□□ -0.05
CD28P10747 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.72□□□□□ -0.05
CD28P10747 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.72□□□□□ -0.05
CD28P10747 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.72□□□□□ -0.05
CD28P10747 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.72□□□□□ -0.05
CD28P10747 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD28P10747 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD28P10747 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms