Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SP9P0CG40 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SP9P0CG40 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.56■□□□□ 0.56
SP9P0CG40 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.56■□□□□ 0.56
SP9P0CG40 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SP9P0CG40 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SP9P0CG40 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SP9P0CG40 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SP9P0CG40 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SP9P0CG40 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SP9P0CG40 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SP9P0CG40 RPS2P28-201ENST00000314255 741 ntBASIC18.56■□□□□ 0.56
SP9P0CG40 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
SP9P0CG40 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.56■□□□□ 0.56
SP9P0CG40 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SP9P0CG40 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.56■□□□□ 0.56
SP9P0CG40 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SP9P0CG40 AC145285.3-201ENST00000564603 959 ntBASIC18.56■□□□□ 0.56
SP9P0CG40 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SP9P0CG40 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SP9P0CG40 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SP9P0CG40 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SP9P0CG40 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SP9P0CG40 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SP9P0CG40 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.56■□□□□ 0.56
SP9P0CG40 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SP9P0CG40 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SP9P0CG40 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.56■□□□□ 0.56
SP9P0CG40 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SP9P0CG40 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.55■□□□□ 0.56
SP9P0CG40 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SP9P0CG40 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SP9P0CG40 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.55■□□□□ 0.56
SP9P0CG40 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SP9P0CG40 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SP9P0CG40 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SP9P0CG40 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SP9P0CG40 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SP9P0CG40 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.55■□□□□ 0.56
SP9P0CG40 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SP9P0CG40 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SP9P0CG40 AC096582.2-201ENST00000510860 516 ntBASIC18.55■□□□□ 0.56
SP9P0CG40 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.55■□□□□ 0.56
SP9P0CG40 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.55■□□□□ 0.56
SP9P0CG40 AL356488.2-201ENST00000602755 427 ntBASIC18.55■□□□□ 0.56
SP9P0CG40 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.55■□□□□ 0.56
SP9P0CG40 AC114341.1-201ENST00000618070 349 ntBASIC18.55■□□□□ 0.56
SP9P0CG40 AL355877.3-201ENST00000622820 899 ntBASIC18.55■□□□□ 0.56
SP9P0CG40 AC083906.6-201ENST00000641366 219 ntBASIC18.55■□□□□ 0.56
SP9P0CG40 AC079781.4-201ENST00000641908 219 ntBASIC18.55■□□□□ 0.56
SP9P0CG40 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SP9P0CG40 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SP9P0CG40 AC008556.1-201ENST00000610908 2040 ntBASIC18.55■□□□□ 0.56
SP9P0CG40 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SP9P0CG40 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SP9P0CG40 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.55■□□□□ 0.56
SP9P0CG40 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
SP9P0CG40 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.54■□□□□ 0.56
SP9P0CG40 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SP9P0CG40 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SP9P0CG40 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SP9P0CG40 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SP9P0CG40 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SP9P0CG40 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
SP9P0CG40 GPX1P2-201ENST00000429271 606 ntBASIC18.54■□□□□ 0.56
SP9P0CG40 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.54■□□□□ 0.56
SP9P0CG40 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.54■□□□□ 0.56
SP9P0CG40 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.54■□□□□ 0.56
SP9P0CG40 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.54■□□□□ 0.56
SP9P0CG40 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.54■□□□□ 0.56
SP9P0CG40 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.54■□□□□ 0.56
SP9P0CG40 FAM197Y3-203ENST00000618346 717 ntBASIC18.54■□□□□ 0.56
SP9P0CG40 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SP9P0CG40 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SP9P0CG40 AC104109.2-201ENST00000602919 1418 ntBASIC18.54■□□□□ 0.56
SP9P0CG40 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SP9P0CG40 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SP9P0CG40 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SP9P0CG40 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.54■□□□□ 0.56
SP9P0CG40 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.54■□□□□ 0.56
SP9P0CG40 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SP9P0CG40 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SP9P0CG40 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SP9P0CG40 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.54■□□□□ 0.56
SP9P0CG40 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SP9P0CG40 RCC2P3-201ENST00000418112 1537 ntBASIC18.54■□□□□ 0.56
SP9P0CG40 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SP9P0CG40 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
SP9P0CG40 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SP9P0CG40 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SP9P0CG40 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SP9P0CG40 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SP9P0CG40 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SP9P0CG40 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.53■□□□□ 0.56
SP9P0CG40 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SP9P0CG40 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SP9P0CG40 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SP9P0CG40 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SP9P0CG40 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SP9P0CG40 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms