Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFBP01127 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFBP01127 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.95■□□□□ 0.62
PDGFBP01127 AC104390.1-201ENST00000555663 520 ntBASIC18.95■□□□□ 0.62
PDGFBP01127 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.95■□□□□ 0.62
PDGFBP01127 MIR5100-201ENST00000579544 119 ntBASIC18.95■□□□□ 0.62
PDGFBP01127 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.95■□□□□ 0.62
PDGFBP01127 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.95■□□□□ 0.62
PDGFBP01127 BNIP3P18-201ENST00000593976 575 ntBASIC18.95■□□□□ 0.62
PDGFBP01127 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.95■□□□□ 0.62
PDGFBP01127 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFBP01127 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFBP01127 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.95■□□□□ 0.62
PDGFBP01127 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFBP01127 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFBP01127 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFBP01127 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PDGFBP01127 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.95■□□□□ 0.62
PDGFBP01127 SDHAP1-207ENST00000440850 2000 ntBASIC18.95■□□□□ 0.62
PDGFBP01127 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFBP01127 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDGFBP01127 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDGFBP01127 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
PDGFBP01127 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.94■□□□□ 0.62
PDGFBP01127 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PDGFBP01127 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PDGFBP01127 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PDGFBP01127 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.94■□□□□ 0.62
PDGFBP01127 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.94■□□□□ 0.62
PDGFBP01127 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.94■□□□□ 0.62
PDGFBP01127 RPSAP43-201ENST00000402237 625 ntBASIC18.94■□□□□ 0.62
PDGFBP01127 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.94■□□□□ 0.62
PDGFBP01127 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
PDGFBP01127 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PDGFBP01127 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDGFBP01127 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.94■□□□□ 0.62
PDGFBP01127 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.94■□□□□ 0.62
PDGFBP01127 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.94■□□□□ 0.62
PDGFBP01127 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.94■□□□□ 0.62
PDGFBP01127 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PDGFBP01127 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.94■□□□□ 0.62
PDGFBP01127 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDGFBP01127 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.94■□□□□ 0.62
PDGFBP01127 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.94■□□□□ 0.62
PDGFBP01127 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PDGFBP01127 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
PDGFBP01127 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.94■□□□□ 0.62
PDGFBP01127 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDGFBP01127 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PDGFBP01127 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDGFBP01127 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDGFBP01127 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDGFBP01127 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDGFBP01127 AC009237.14-201ENST00000609975 1594 ntBASIC18.93■□□□□ 0.62
PDGFBP01127 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.93■□□□□ 0.62
PDGFBP01127 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.93■□□□□ 0.62
PDGFBP01127 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PDGFBP01127 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PDGFBP01127 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDGFBP01127 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.93■□□□□ 0.62
PDGFBP01127 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.93■□□□□ 0.62
PDGFBP01127 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDGFBP01127 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.93■□□□□ 0.62
PDGFBP01127 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.93■□□□□ 0.62
PDGFBP01127 AC132008.2-207ENST00000454517 770 ntBASIC18.93■□□□□ 0.62
PDGFBP01127 SCARNA2-201ENST00000458748 420 ntBASIC18.93■□□□□ 0.62
PDGFBP01127 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.93■□□□□ 0.62
PDGFBP01127 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.93■□□□□ 0.62
PDGFBP01127 AL356488.2-201ENST00000602755 427 ntBASIC18.93■□□□□ 0.62
PDGFBP01127 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDGFBP01127 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDGFBP01127 AC012676.1-201ENST00000574705 1949 ntBASIC18.93■□□□□ 0.62
PDGFBP01127 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.93■□□□□ 0.62
PDGFBP01127 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDGFBP01127 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.93■□□□□ 0.62
PDGFBP01127 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDGFBP01127 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.93■□□□□ 0.62
PDGFBP01127 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.93■□□□□ 0.62
PDGFBP01127 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PDGFBP01127 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PDGFBP01127 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDGFBP01127 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PDGFBP01127 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDGFBP01127 TREX1-205ENST00000625293 1783 ntBASIC18.92■□□□□ 0.62
PDGFBP01127 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDGFBP01127 GPX1P2-201ENST00000429271 606 ntBASIC18.92■□□□□ 0.62
PDGFBP01127 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.92■□□□□ 0.62
PDGFBP01127 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDGFBP01127 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDGFBP01127 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDGFBP01127 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.92■□□□□ 0.62
PDGFBP01127 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDGFBP01127 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDGFBP01127 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.92■□□□□ 0.62
PDGFBP01127 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PDGFBP01127 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDGFBP01127 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDGFBP01127 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.92■□□□□ 0.62
PDGFBP01127 AC104109.2-201ENST00000602919 1418 ntBASIC18.91■□□□□ 0.62
PDGFBP01127 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms