Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 BAD-202ENST00000394531 631 ntTSL 3 BASIC8.41□□□□□ -1.06
USH2AO75445 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC8.41□□□□□ -1.06
USH2AO75445 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC8.41□□□□□ -1.06
USH2AO75445 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
USH2AO75445 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
USH2AO75445 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
USH2AO75445 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC8.41□□□□□ -1.06
USH2AO75445 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
USH2AO75445 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC8.41□□□□□ -1.06
USH2AO75445 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC8.41□□□□□ -1.06
USH2AO75445 AL078644.1-201ENST00000609881 752 ntBASIC8.41□□□□□ -1.06
USH2AO75445 SNX12-206ENST00000622259 661 ntTSL 5 BASIC8.41□□□□□ -1.06
USH2AO75445 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
USH2AO75445 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
USH2AO75445 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
USH2AO75445 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
USH2AO75445 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC8.41□□□□□ -1.06
USH2AO75445 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
USH2AO75445 AL023284.2-201ENST00000405850 579 ntBASIC8.41□□□□□ -1.06
USH2AO75445 MIR6799-201ENST00000620297 69 ntBASIC8.41□□□□□ -1.06
USH2AO75445 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
USH2AO75445 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
USH2AO75445 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC8.41□□□□□ -1.06
USH2AO75445 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
USH2AO75445 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
USH2AO75445 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
USH2AO75445 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
USH2AO75445 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
USH2AO75445 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
USH2AO75445 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC8.4□□□□□ -1.06
USH2AO75445 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC8.4□□□□□ -1.06
USH2AO75445 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC8.4□□□□□ -1.06
USH2AO75445 AP001269.4-201ENST00000609611 512 ntBASIC8.4□□□□□ -1.06
USH2AO75445 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC8.4□□□□□ -1.06
USH2AO75445 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
USH2AO75445 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
USH2AO75445 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
USH2AO75445 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC8.4□□□□□ -1.06
USH2AO75445 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
USH2AO75445 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
USH2AO75445 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
USH2AO75445 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC8.4□□□□□ -1.06
USH2AO75445 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC8.4□□□□□ -1.06
USH2AO75445 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
USH2AO75445 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC8.4□□□□□ -1.06
USH2AO75445 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC8.4□□□□□ -1.06
USH2AO75445 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC8.4□□□□□ -1.06
USH2AO75445 AC011467.4-201ENST00000594891 528 ntBASIC8.4□□□□□ -1.06
USH2AO75445 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC8.4□□□□□ -1.06
USH2AO75445 AC114341.1-201ENST00000618070 349 ntBASIC8.4□□□□□ -1.06
USH2AO75445 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC8.4□□□□□ -1.06
USH2AO75445 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
USH2AO75445 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
USH2AO75445 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
USH2AO75445 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC8.4□□□□□ -1.06
USH2AO75445 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
USH2AO75445 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
USH2AO75445 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
USH2AO75445 AL162377.1-201ENST00000618844 1793 ntBASIC8.4□□□□□ -1.06
USH2AO75445 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC8.4□□□□□ -1.06
USH2AO75445 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
USH2AO75445 SNHG9-202ENST00000564014 471 ntBASIC8.4□□□□□ -1.06
USH2AO75445 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC8.4□□□□□ -1.06
USH2AO75445 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC8.4□□□□□ -1.06
USH2AO75445 AC010240.3-201ENST00000607688 395 ntBASIC8.4□□□□□ -1.06
USH2AO75445 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
USH2AO75445 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
USH2AO75445 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
USH2AO75445 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
USH2AO75445 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
USH2AO75445 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
USH2AO75445 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
USH2AO75445 AL139400.1-201ENST00000366220 510 ntBASIC8.4□□□□□ -1.07
USH2AO75445 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
USH2AO75445 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
USH2AO75445 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC8.4□□□□□ -1.07
USH2AO75445 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC8.4□□□□□ -1.07
USH2AO75445 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC8.4□□□□□ -1.07
USH2AO75445 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC8.4□□□□□ -1.07
USH2AO75445 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
USH2AO75445 INO80C-206ENST00000586489 594 ntTSL 3 BASIC8.4□□□□□ -1.07
USH2AO75445 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
USH2AO75445 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
USH2AO75445 PARN-205ENST00000539279 1557 ntTSL 2 BASIC8.4□□□□□ -1.07
USH2AO75445 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC8.39□□□□□ -1.07
USH2AO75445 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
USH2AO75445 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
USH2AO75445 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC8.39□□□□□ -1.07
USH2AO75445 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC8.39□□□□□ -1.07
USH2AO75445 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
USH2AO75445 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC8.39□□□□□ -1.07
USH2AO75445 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
USH2AO75445 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
USH2AO75445 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
USH2AO75445 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
USH2AO75445 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC8.39□□□□□ -1.07
USH2AO75445 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
USH2AO75445 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
USH2AO75445 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC8.39□□□□□ -1.07
USH2AO75445 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms