Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDH7O60245 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDH7O60245 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDH7O60245 ANO7L1-203ENST00000602586 1720 ntBASIC18.03■□□□□ 0.48
PCDH7O60245 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH7O60245 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDH7O60245 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH7O60245 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH7O60245 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDH7O60245 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDH7O60245 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDH7O60245 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDH7O60245 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH7O60245 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PCDH7O60245 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH7O60245 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PCDH7O60245 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH7O60245 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDH7O60245 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH7O60245 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH7O60245 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH7O60245 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH7O60245 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
PCDH7O60245 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDH7O60245 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH7O60245 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH7O60245 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDH7O60245 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDH7O60245 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDH7O60245 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.02■□□□□ 0.48
PCDH7O60245 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDH7O60245 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.02■□□□□ 0.48
PCDH7O60245 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH7O60245 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH7O60245 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH7O60245 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
PCDH7O60245 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
PCDH7O60245 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH7O60245 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH7O60245 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH7O60245 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH7O60245 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.02■□□□□ 0.47
PCDH7O60245 AC104581.1-202ENST00000635932 2618 ntBASIC18.02■□□□□ 0.47
PCDH7O60245 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH7O60245 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDH7O60245 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDH7O60245 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
PCDH7O60245 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH7O60245 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH7O60245 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH7O60245 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH7O60245 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH7O60245 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH7O60245 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH7O60245 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH7O60245 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.01■□□□□ 0.47
PCDH7O60245 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PCDH7O60245 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH7O60245 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PCDH7O60245 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH7O60245 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH7O60245 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDH7O60245 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PCDH7O60245 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
PCDH7O60245 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDH7O60245 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH7O60245 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH7O60245 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDH7O60245 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH7O60245 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH7O60245 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH7O60245 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH7O60245 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18■□□□□ 0.47
PCDH7O60245 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18■□□□□ 0.47
PCDH7O60245 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18■□□□□ 0.47
PCDH7O60245 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH7O60245 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18■□□□□ 0.47
PCDH7O60245 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH7O60245 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH7O60245 AL135905.2-201ENST00000584934 1404 ntBASIC18■□□□□ 0.47
PCDH7O60245 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PCDH7O60245 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH7O60245 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PCDH7O60245 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH7O60245 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDH7O60245 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18■□□□□ 0.47
PCDH7O60245 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH7O60245 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDH7O60245 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18■□□□□ 0.47
PCDH7O60245 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18■□□□□ 0.47
PCDH7O60245 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18■□□□□ 0.47
PCDH7O60245 AC142381.4-202ENST00000563973 229 ntBASIC18■□□□□ 0.47
PCDH7O60245 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18■□□□□ 0.47
PCDH7O60245 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18■□□□□ 0.47
PCDH7O60245 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PCDH7O60245 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PCDH7O60245 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH7O60245 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH7O60245 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18■□□□□ 0.47
PCDH7O60245 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms