Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM38O00635 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM38O00635 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
TRIM38O00635 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TRIM38O00635 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM38O00635 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM38O00635 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM38O00635 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM38O00635 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.96■□□□□ 0.63
TRIM38O00635 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM38O00635 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.96■□□□□ 0.63
TRIM38O00635 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM38O00635 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM38O00635 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM38O00635 AC117947.1-201ENST00000427448 529 ntBASIC18.96■□□□□ 0.63
TRIM38O00635 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM38O00635 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.96■□□□□ 0.63
TRIM38O00635 AC063952.2-201ENST00000498792 1227 ntBASIC18.96■□□□□ 0.63
TRIM38O00635 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.96■□□□□ 0.63
TRIM38O00635 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
TRIM38O00635 AL138966.2-201ENST00000621997 464 ntBASIC18.96■□□□□ 0.63
TRIM38O00635 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM38O00635 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.96■□□□□ 0.63
TRIM38O00635 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM38O00635 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TRIM38O00635 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM38O00635 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM38O00635 LETM1P2-201ENST00000597330 2178 ntBASIC18.96■□□□□ 0.63
TRIM38O00635 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM38O00635 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM38O00635 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM38O00635 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM38O00635 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM38O00635 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM38O00635 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM38O00635 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM38O00635 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM38O00635 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM38O00635 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM38O00635 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM38O00635 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM38O00635 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM38O00635 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM38O00635 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM38O00635 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRIM38O00635 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM38O00635 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM38O00635 Z85996.1-201ENST00000494644 937 ntBASIC18.95■□□□□ 0.62
TRIM38O00635 AC022616.7-201ENST00000525383 220 ntBASIC18.95■□□□□ 0.62
TRIM38O00635 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TRIM38O00635 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM38O00635 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM38O00635 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM38O00635 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM38O00635 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM38O00635 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM38O00635 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM38O00635 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM38O00635 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM38O00635 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM38O00635 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM38O00635 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM38O00635 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.94■□□□□ 0.62
TRIM38O00635 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM38O00635 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM38O00635 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM38O00635 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRIM38O00635 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM38O00635 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM38O00635 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM38O00635 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM38O00635 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM38O00635 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM38O00635 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM38O00635 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
TRIM38O00635 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.94■□□□□ 0.62
TRIM38O00635 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM38O00635 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.94■□□□□ 0.62
TRIM38O00635 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.94■□□□□ 0.62
TRIM38O00635 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.94■□□□□ 0.62
TRIM38O00635 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.94■□□□□ 0.62
TRIM38O00635 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
TRIM38O00635 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TRIM38O00635 AC139887.4-201ENST00000607877 719 ntBASIC18.94■□□□□ 0.62
TRIM38O00635 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
TRIM38O00635 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM38O00635 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM38O00635 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM38O00635 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM38O00635 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM38O00635 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.94■□□□□ 0.62
TRIM38O00635 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM38O00635 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.94■□□□□ 0.62
TRIM38O00635 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM38O00635 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM38O00635 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM38O00635 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
TRIM38O00635 KRT8P8-201ENST00000434750 1448 ntBASIC18.93■□□□□ 0.62
TRIM38O00635 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM38O00635 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms