Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC85CA6NKD9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC85CA6NKD9 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC20.89■□□□□ 0.94
CCDC85CA6NKD9 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC85CA6NKD9 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC85CA6NKD9 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC85CA6NKD9 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC85CA6NKD9 TSEN15P1-201ENST00000423257 515 ntBASIC20.89■□□□□ 0.93
CCDC85CA6NKD9 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC85CA6NKD9 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CCDC85CA6NKD9 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CCDC85CA6NKD9 AL359881.2-201ENST00000602973 570 ntBASIC20.89■□□□□ 0.93
CCDC85CA6NKD9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC85CA6NKD9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC85CA6NKD9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC85CA6NKD9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CCDC85CA6NKD9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC85CA6NKD9 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC85CA6NKD9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC85CA6NKD9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC85CA6NKD9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC85CA6NKD9 AIRN-201ENST00000601203 4374 ntBASIC20.88■□□□□ 0.93
CCDC85CA6NKD9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC85CA6NKD9 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC85CA6NKD9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC85CA6NKD9 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC85CA6NKD9 AC009947.1-201ENST00000444350 727 ntBASIC20.88■□□□□ 0.93
CCDC85CA6NKD9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC85CA6NKD9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC85CA6NKD9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC85CA6NKD9 AP002414.3-201ENST00000589352 1468 ntBASIC20.88■□□□□ 0.93
CCDC85CA6NKD9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC85CA6NKD9 AL162377.1-201ENST00000618844 1793 ntBASIC20.87■□□□□ 0.93
CCDC85CA6NKD9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC85CA6NKD9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC85CA6NKD9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC85CA6NKD9 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CCDC85CA6NKD9 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC85CA6NKD9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CCDC85CA6NKD9 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC85CA6NKD9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC85CA6NKD9 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC85CA6NKD9 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.87■□□□□ 0.93
CCDC85CA6NKD9 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.87■□□□□ 0.93
CCDC85CA6NKD9 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC85CA6NKD9 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC85CA6NKD9 AC027612.4-201ENST00000605371 583 ntBASIC20.87■□□□□ 0.93
CCDC85CA6NKD9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC85CA6NKD9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC85CA6NKD9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC85CA6NKD9 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC85CA6NKD9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC85CA6NKD9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC85CA6NKD9 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC85CA6NKD9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC85CA6NKD9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC85CA6NKD9 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC85CA6NKD9 CEND1P1-201ENST00000451006 455 ntBASIC20.86■□□□□ 0.93
CCDC85CA6NKD9 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC85CA6NKD9 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC85CA6NKD9 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC85CA6NKD9 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC85CA6NKD9 Z92544.3-201ENST00000624747 417 ntBASIC20.86■□□□□ 0.93
CCDC85CA6NKD9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC85CA6NKD9 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC85CA6NKD9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC85CA6NKD9 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC85CA6NKD9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC85CA6NKD9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC85CA6NKD9 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC85CA6NKD9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 GAPDHP21-201ENST00000450301 1010 ntBASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 AC024563.2-201ENST00000603282 481 ntBASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 C20orf181-201ENST00000623918 480 ntBASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC85CA6NKD9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms