Protein–RNA interactions for Protein: A4D0S4

LAMB4, Laminin subunit beta-4, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB4A4D0S4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
LAMB4A4D0S4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LAMB4A4D0S4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC23.83■■□□□ 1.41
LAMB4A4D0S4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC23.83■■□□□ 1.41
LAMB4A4D0S4 AC012615.1-201ENST00000565797 1299 ntBASIC23.83■■□□□ 1.41
LAMB4A4D0S4 IFNL4P1-201ENST00000607083 540 ntBASIC23.83■■□□□ 1.41
LAMB4A4D0S4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC23.83■■□□□ 1.41
LAMB4A4D0S4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LAMB4A4D0S4 KRT8P50-201ENST00000562022 1438 ntBASIC23.83■■□□□ 1.41
LAMB4A4D0S4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
LAMB4A4D0S4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LAMB4A4D0S4 AC006333.2-201ENST00000607957 2099 ntBASIC23.83■■□□□ 1.41
LAMB4A4D0S4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC23.83■■□□□ 1.41
LAMB4A4D0S4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC23.83■■□□□ 1.4
LAMB4A4D0S4 KRT8P26-201ENST00000534154 1276 ntBASIC23.83■■□□□ 1.4
LAMB4A4D0S4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC23.83■■□□□ 1.4
LAMB4A4D0S4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.4
LAMB4A4D0S4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC23.83■■□□□ 1.4
LAMB4A4D0S4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC23.82■■□□□ 1.4
LAMB4A4D0S4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC23.82■■□□□ 1.4
LAMB4A4D0S4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LAMB4A4D0S4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
LAMB4A4D0S4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LAMB4A4D0S4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC23.82■■□□□ 1.4
LAMB4A4D0S4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC23.82■■□□□ 1.4
LAMB4A4D0S4 MIR662-201ENST00000384847 95 ntBASIC23.82■■□□□ 1.4
LAMB4A4D0S4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LAMB4A4D0S4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC23.82■■□□□ 1.4
LAMB4A4D0S4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LAMB4A4D0S4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC23.82■■□□□ 1.4
LAMB4A4D0S4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LAMB4A4D0S4 AC092119.3-201ENST00000612618 583 ntBASIC23.82■■□□□ 1.4
LAMB4A4D0S4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC23.82■■□□□ 1.4
LAMB4A4D0S4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
LAMB4A4D0S4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LAMB4A4D0S4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LAMB4A4D0S4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC23.82■■□□□ 1.4
LAMB4A4D0S4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LAMB4A4D0S4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LAMB4A4D0S4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LAMB4A4D0S4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LAMB4A4D0S4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
LAMB4A4D0S4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
LAMB4A4D0S4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LAMB4A4D0S4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC23.81■■□□□ 1.4
LAMB4A4D0S4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC23.81■■□□□ 1.4
LAMB4A4D0S4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC23.81■■□□□ 1.4
LAMB4A4D0S4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC23.81■■□□□ 1.4
LAMB4A4D0S4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
LAMB4A4D0S4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LAMB4A4D0S4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC23.81■■□□□ 1.4
LAMB4A4D0S4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LAMB4A4D0S4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LAMB4A4D0S4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LAMB4A4D0S4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LAMB4A4D0S4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LAMB4A4D0S4 KRT126P-201ENST00000549467 1181 ntBASIC23.8■■□□□ 1.4
LAMB4A4D0S4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC23.8■■□□□ 1.4
LAMB4A4D0S4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC23.8■■□□□ 1.4
LAMB4A4D0S4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC23.8■■□□□ 1.4
LAMB4A4D0S4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC23.8■■□□□ 1.4
LAMB4A4D0S4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC23.8■■□□□ 1.4
LAMB4A4D0S4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
LAMB4A4D0S4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC23.8■■□□□ 1.4
LAMB4A4D0S4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LAMB4A4D0S4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC23.8■■□□□ 1.4
LAMB4A4D0S4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC23.8■■□□□ 1.4
LAMB4A4D0S4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC23.8■■□□□ 1.4
LAMB4A4D0S4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC23.8■■□□□ 1.4
LAMB4A4D0S4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC23.8■■□□□ 1.4
LAMB4A4D0S4 AL390719.2-201ENST00000606993 987 ntBASIC23.8■■□□□ 1.4
LAMB4A4D0S4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LAMB4A4D0S4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC23.8■■□□□ 1.4
LAMB4A4D0S4 NFYC-AS1-201ENST00000606277 1687 ntBASIC23.8■■□□□ 1.4
LAMB4A4D0S4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LAMB4A4D0S4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LAMB4A4D0S4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LAMB4A4D0S4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LAMB4A4D0S4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LAMB4A4D0S4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LAMB4A4D0S4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LAMB4A4D0S4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LAMB4A4D0S4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LAMB4A4D0S4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
LAMB4A4D0S4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC23.79■■□□□ 1.4
LAMB4A4D0S4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LAMB4A4D0S4 PRELID1P1-202ENST00000567272 903 ntBASIC23.79■■□□□ 1.4
LAMB4A4D0S4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LAMB4A4D0S4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LAMB4A4D0S4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
LAMB4A4D0S4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LAMB4A4D0S4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LAMB4A4D0S4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC23.78■■□□□ 1.4
LAMB4A4D0S4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC23.78■■□□□ 1.4
LAMB4A4D0S4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
LAMB4A4D0S4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC23.78■■□□□ 1.4
LAMB4A4D0S4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC23.78■■□□□ 1.4
LAMB4A4D0S4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LAMB4A4D0S4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
LAMB4A4D0S4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms