Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PDZRN3Q9UPQ7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDZRN3Q9UPQ7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.28□□□□□ -1.88
PDZRN3Q9UPQ7 RNU6-1083P-201ENST00000384022 107 ntBASIC3.28□□□□□ -1.88
PDZRN3Q9UPQ7 SNORA72.6-201ENST00000384520 129 ntBASIC3.28□□□□□ -1.88
PDZRN3Q9UPQ7 RNA5SP109-201ENST00000391010 116 ntBASIC3.28□□□□□ -1.88
PDZRN3Q9UPQ7 RNU4-53P-201ENST00000410828 140 ntBASIC3.28□□□□□ -1.88
PDZRN3Q9UPQ7 AC003685.2-201ENST00000422795 395 ntBASIC3.28□□□□□ -1.88
PDZRN3Q9UPQ7 snoU13.17-201ENST00000458802 104 ntBASIC3.28□□□□□ -1.88
PDZRN3Q9UPQ7 RN7SL636P-201ENST00000497504 294 ntBASIC3.28□□□□□ -1.88
PDZRN3Q9UPQ7 SCARNA17.1-201ENST00000516211 143 ntBASIC3.28□□□□□ -1.88
PDZRN3Q9UPQ7 SCARNA17.2-201ENST00000516334 143 ntBASIC3.28□□□□□ -1.88
PDZRN3Q9UPQ7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.28□□□□□ -1.88
PDZRN3Q9UPQ7 AP000753.3-201ENST00000604083 169 ntBASIC3.28□□□□□ -1.88
PDZRN3Q9UPQ7 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.28□□□□□ -1.88
PDZRN3Q9UPQ7 SCARNA17.4-201ENST00000614296 143 ntBASIC3.28□□□□□ -1.88
PDZRN3Q9UPQ7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.28□□□□□ -1.88
PDZRN3Q9UPQ7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.28□□□□□ -1.88
PDZRN3Q9UPQ7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PDZRN3Q9UPQ7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PDZRN3Q9UPQ7 RNU6-833P-201ENST00000363486 107 ntBASIC3.27□□□□□ -1.89
PDZRN3Q9UPQ7 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.27□□□□□ -1.89
PDZRN3Q9UPQ7 AL356320.1-201ENST00000429616 163 ntBASIC3.27□□□□□ -1.89
PDZRN3Q9UPQ7 snoU13.23-201ENST00000458863 104 ntBASIC3.27□□□□□ -1.89
PDZRN3Q9UPQ7 RNU6-850P-201ENST00000516934 103 ntBASIC3.27□□□□□ -1.89
PDZRN3Q9UPQ7 MIR4648-201ENST00000580107 72 ntBASIC3.27□□□□□ -1.89
PDZRN3Q9UPQ7 AC090897.1-201ENST00000580909 226 ntBASIC3.27□□□□□ -1.89
PDZRN3Q9UPQ7 MIR548AR-201ENST00000582191 57 ntBASIC3.27□□□□□ -1.89
PDZRN3Q9UPQ7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.27□□□□□ -1.89
PDZRN3Q9UPQ7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.27□□□□□ -1.89
PDZRN3Q9UPQ7 AL449363.1-201ENST00000617815 186 ntBASIC3.27□□□□□ -1.89
PDZRN3Q9UPQ7 MIR7978-201ENST00000636158 59 ntBASIC3.27□□□□□ -1.89
PDZRN3Q9UPQ7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PDZRN3Q9UPQ7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PDZRN3Q9UPQ7 RNU6-862P-201ENST00000362804 105 ntBASIC3.26□□□□□ -1.89
PDZRN3Q9UPQ7 RNY1P13-201ENST00000365030 105 ntBASIC3.26□□□□□ -1.89
PDZRN3Q9UPQ7 RNU6-291P-201ENST00000384720 107 ntBASIC3.26□□□□□ -1.89
PDZRN3Q9UPQ7 RPL23AP6-201ENST00000446637 472 ntBASIC3.26□□□□□ -1.89
PDZRN3Q9UPQ7 MIR8054-201ENST00000620877 86 ntBASIC3.26□□□□□ -1.89
PDZRN3Q9UPQ7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PDZRN3Q9UPQ7 U8.16-201ENST00000391279 133 ntBASIC3.25□□□□□ -1.89
PDZRN3Q9UPQ7 MIR2113-201ENST00000459007 91 ntBASIC3.25□□□□□ -1.89
PDZRN3Q9UPQ7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.25□□□□□ -1.89
PDZRN3Q9UPQ7 RNU6-881P-201ENST00000516813 102 ntBASIC3.25□□□□□ -1.89
PDZRN3Q9UPQ7 Y_RNA.722-201ENST00000517279 114 ntBASIC3.25□□□□□ -1.89
PDZRN3Q9UPQ7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
PDZRN3Q9UPQ7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.24□□□□□ -1.89
PDZRN3Q9UPQ7 Y_RNA.354-201ENST00000365448 111 ntBASIC3.24□□□□□ -1.89
PDZRN3Q9UPQ7 MIR95-201ENST00000385072 81 ntBASIC3.24□□□□□ -1.89
PDZRN3Q9UPQ7 HMGN2P35-201ENST00000412164 270 ntBASIC3.24□□□□□ -1.89
PDZRN3Q9UPQ7 AC093850.1-201ENST00000454121 251 ntBASIC3.24□□□□□ -1.89
PDZRN3Q9UPQ7 AC018868.1-201ENST00000491307 315 ntBASIC3.24□□□□□ -1.89
PDZRN3Q9UPQ7 SNORD14A-201ENST00000606526 91 ntBASIC3.24□□□□□ -1.89
PDZRN3Q9UPQ7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PDZRN3Q9UPQ7 RNU6-340P-201ENST00000364005 107 ntBASIC3.23□□□□□ -1.89
PDZRN3Q9UPQ7 RNU6-461P-201ENST00000364195 107 ntBASIC3.23□□□□□ -1.89
PDZRN3Q9UPQ7 RNU6-1019P-201ENST00000364424 107 ntBASIC3.23□□□□□ -1.89
PDZRN3Q9UPQ7 Y_RNA.283-201ENST00000364798 112 ntBASIC3.23□□□□□ -1.89
PDZRN3Q9UPQ7 RNY1P2-201ENST00000364820 117 ntBASIC3.23□□□□□ -1.89
PDZRN3Q9UPQ7 MIR548U-201ENST00000390728 81 ntBASIC3.23□□□□□ -1.89
PDZRN3Q9UPQ7 SNORA31.10-201ENST00000516482 106 ntBASIC3.23□□□□□ -1.89
PDZRN3Q9UPQ7 DEFB122-202ENST00000569013 197 ntBASIC3.23□□□□□ -1.89
PDZRN3Q9UPQ7 AL356280.1-201ENST00000603614 379 ntBASIC3.23□□□□□ -1.89
PDZRN3Q9UPQ7 SNORA28-201ENST00000606769 126 ntBASIC3.23□□□□□ -1.89
PDZRN3Q9UPQ7 Z97988.1-201ENST00000637697 135 ntBASIC3.23□□□□□ -1.89
PDZRN3Q9UPQ7 MIR7515-201ENST00000637837 67 ntBASIC3.23□□□□□ -1.89
PDZRN3Q9UPQ7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
PDZRN3Q9UPQ7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.22□□□□□ -1.89
PDZRN3Q9UPQ7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PDZRN3Q9UPQ7 MIRLET7F1-201ENST00000362202 87 ntBASIC3.22□□□□□ -1.89
PDZRN3Q9UPQ7 SNORD115-3-201ENST00000363100 82 ntBASIC3.22□□□□□ -1.89
PDZRN3Q9UPQ7 SNORD115-22-201ENST00000364456 82 ntBASIC3.22□□□□□ -1.89
PDZRN3Q9UPQ7 snoU13.16-201ENST00000459350 104 ntBASIC3.22□□□□□ -1.89
PDZRN3Q9UPQ7 RNA5SP320-201ENST00000516263 124 ntBASIC3.22□□□□□ -1.89
PDZRN3Q9UPQ7 AC133485.1-201ENST00000567176 124 ntBASIC3.22□□□□□ -1.89
PDZRN3Q9UPQ7 AC069114.2-201ENST00000604699 304 ntBASIC3.22□□□□□ -1.89
PDZRN3Q9UPQ7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PDZRN3Q9UPQ7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.21□□□□□ -1.9
PDZRN3Q9UPQ7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PDZRN3Q9UPQ7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.21□□□□□ -1.9
PDZRN3Q9UPQ7 RNA5SP289-201ENST00000362332 137 ntBASIC3.21□□□□□ -1.9
PDZRN3Q9UPQ7 RNU6-1216P-201ENST00000362590 107 ntBASIC3.21□□□□□ -1.9
PDZRN3Q9UPQ7 SNORD36A-201ENST00000362874 73 ntBASIC3.21□□□□□ -1.9
PDZRN3Q9UPQ7 RN7SKP223-201ENST00000410582 62 ntBASIC3.21□□□□□ -1.9
PDZRN3Q9UPQ7 RNU6-1328P-201ENST00000410938 106 ntBASIC3.21□□□□□ -1.9
PDZRN3Q9UPQ7 MICF-203ENST00000432679 129 ntBASIC3.21□□□□□ -1.9
PDZRN3Q9UPQ7 MIR3670-2-201ENST00000582974 65 ntBASIC3.21□□□□□ -1.9
PDZRN3Q9UPQ7 MIR3675-201ENST00000583661 73 ntBASIC3.21□□□□□ -1.9
PDZRN3Q9UPQ7 MIR3670-1-201ENST00000584160 65 ntBASIC3.21□□□□□ -1.9
PDZRN3Q9UPQ7 MIR3670-3-201ENST00000584855 65 ntBASIC3.21□□□□□ -1.9
PDZRN3Q9UPQ7 SNORD92-201ENST00000585078 85 ntBASIC3.21□□□□□ -1.9
PDZRN3Q9UPQ7 AL357312.1-201ENST00000603879 298 ntBASIC3.21□□□□□ -1.9
PDZRN3Q9UPQ7 MIR3670-4-201ENST00000612260 65 ntBASIC3.21□□□□□ -1.9
PDZRN3Q9UPQ7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PDZRN3Q9UPQ7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PDZRN3Q9UPQ7 Y_RNA.537-201ENST00000384626 109 ntBASIC3.2□□□□□ -1.9
PDZRN3Q9UPQ7 MIR136-201ENST00000385207 82 ntBASIC3.2□□□□□ -1.9
PDZRN3Q9UPQ7 SNORA40.6-201ENST00000391153 128 ntBASIC3.2□□□□□ -1.9
PDZRN3Q9UPQ7 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PDZRN3Q9UPQ7 SUMO1P4-201ENST00000429430 302 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms