Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.34□□□□□ -1.87
NBPF3Q9H094 RNU1-112P-201ENST00000364401 164 ntBASIC3.34□□□□□ -1.87
NBPF3Q9H094 RNU6-499P-201ENST00000365615 107 ntBASIC3.34□□□□□ -1.87
NBPF3Q9H094 AC019129.1-201ENST00000403786 261 ntBASIC3.34□□□□□ -1.87
NBPF3Q9H094 RNU6-75P-201ENST00000515944 104 ntBASIC3.34□□□□□ -1.87
NBPF3Q9H094 MIR4524B-201ENST00000581569 115 ntBASIC3.34□□□□□ -1.87
NBPF3Q9H094 MIR4769-201ENST00000584126 77 ntBASIC3.34□□□□□ -1.87
NBPF3Q9H094 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.34□□□□□ -1.87
NBPF3Q9H094 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NBPF3Q9H094 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NBPF3Q9H094 Y_RNA.12-201ENST00000362393 112 ntBASIC3.33□□□□□ -1.88
NBPF3Q9H094 Y_RNA.491-201ENST00000384417 107 ntBASIC3.33□□□□□ -1.88
NBPF3Q9H094 MIR512-1-201ENST00000384913 84 ntBASIC3.33□□□□□ -1.88
NBPF3Q9H094 MIR504-201ENST00000385065 83 ntBASIC3.33□□□□□ -1.88
NBPF3Q9H094 SNORD109B-201ENST00000458961 67 ntBASIC3.33□□□□□ -1.88
NBPF3Q9H094 SNORD109A-201ENST00000459128 67 ntBASIC3.33□□□□□ -1.88
NBPF3Q9H094 AC138749.4-201ENST00000563970 127 ntBASIC3.33□□□□□ -1.88
NBPF3Q9H094 AC008133.2-201ENST00000624540 351 ntBASIC3.33□□□□□ -1.88
NBPF3Q9H094 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.32□□□□□ -1.88
NBPF3Q9H094 AC108206.1-201ENST00000570186 4159 ntBASIC3.32□□□□□ -1.88
NBPF3Q9H094 RNU6-461P-201ENST00000364195 107 ntBASIC3.32□□□□□ -1.88
NBPF3Q9H094 SNORA8.1-201ENST00000384250 140 ntBASIC3.32□□□□□ -1.88
NBPF3Q9H094 SCARNA16.3-201ENST00000516595 184 ntBASIC3.32□□□□□ -1.88
NBPF3Q9H094 MIR548AO-201ENST00000579992 96 ntBASIC3.32□□□□□ -1.88
NBPF3Q9H094 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NBPF3Q9H094 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
NBPF3Q9H094 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
NBPF3Q9H094 RNU6-330P-201ENST00000363015 107 ntBASIC3.31□□□□□ -1.88
NBPF3Q9H094 MIR627-201ENST00000384979 97 ntBASIC3.31□□□□□ -1.88
NBPF3Q9H094 snoU13.26-201ENST00000459452 105 ntBASIC3.31□□□□□ -1.88
NBPF3Q9H094 AC008413.1-201ENST00000511864 177 ntBASIC3.31□□□□□ -1.88
NBPF3Q9H094 SNORA74.3-201ENST00000517108 154 ntBASIC3.31□□□□□ -1.88
NBPF3Q9H094 AL662814.1-201ENST00000617364 121 ntBASIC3.31□□□□□ -1.88
NBPF3Q9H094 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC3.31□□□□□ -1.88
NBPF3Q9H094 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NBPF3Q9H094 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NBPF3Q9H094 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NBPF3Q9H094 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NBPF3Q9H094 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NBPF3Q9H094 MIRLET7F1-201ENST00000362202 87 ntBASIC3.3□□□□□ -1.88
NBPF3Q9H094 Y_RNA.283-201ENST00000364798 112 ntBASIC3.3□□□□□ -1.88
NBPF3Q9H094 RNU6-571P-201ENST00000384128 107 ntBASIC3.3□□□□□ -1.88
NBPF3Q9H094 AL513328.1-201ENST00000446460 224 ntBASIC3.3□□□□□ -1.88
NBPF3Q9H094 AC021506.2-201ENST00000612354 169 ntBASIC3.3□□□□□ -1.88
NBPF3Q9H094 MIR6733-201ENST00000635723 61 ntBASIC3.3□□□□□ -1.88
NBPF3Q9H094 U6.109-201ENST00000636749 87 ntBASIC3.3□□□□□ -1.88
NBPF3Q9H094 MIR660-201ENST00000385235 97 ntBASIC3.29□□□□□ -1.88
NBPF3Q9H094 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
NBPF3Q9H094 AL138827.1-201ENST00000402666 306 ntBASIC3.29□□□□□ -1.88
NBPF3Q9H094 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.29□□□□□ -1.88
NBPF3Q9H094 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.29□□□□□ -1.88
NBPF3Q9H094 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.29□□□□□ -1.88
NBPF3Q9H094 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NBPF3Q9H094 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NBPF3Q9H094 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NBPF3Q9H094 RNU1-58P-201ENST00000362413 163 ntBASIC3.28□□□□□ -1.88
NBPF3Q9H094 SNORD36A-201ENST00000362874 73 ntBASIC3.28□□□□□ -1.88
NBPF3Q9H094 RNU6-949P-201ENST00000384040 107 ntBASIC3.28□□□□□ -1.88
NBPF3Q9H094 MIR548U-201ENST00000390728 81 ntBASIC3.28□□□□□ -1.88
NBPF3Q9H094 BX510359.4-201ENST00000423750 193 ntBASIC3.28□□□□□ -1.88
NBPF3Q9H094 MIR3616-201ENST00000584070 92 ntBASIC3.28□□□□□ -1.88
NBPF3Q9H094 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.28□□□□□ -1.88
NBPF3Q9H094 WWP1P1-201ENST00000466609 2769 ntBASIC3.28□□□□□ -1.89
NBPF3Q9H094 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.28□□□□□ -1.89
NBPF3Q9H094 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.27□□□□□ -1.89
NBPF3Q9H094 SNORD38B-201ENST00000384690 67 ntBASIC3.27□□□□□ -1.89
NBPF3Q9H094 MIR516A2-201ENST00000384888 90 ntBASIC3.27□□□□□ -1.89
NBPF3Q9H094 MIR516A1-201ENST00000385033 90 ntBASIC3.27□□□□□ -1.89
NBPF3Q9H094 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NBPF3Q9H094 MIR4764-201ENST00000580680 88 ntBASIC3.27□□□□□ -1.89
NBPF3Q9H094 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.27□□□□□ -1.89
NBPF3Q9H094 AC022202.1-201ENST00000613515 211 ntBASIC3.27□□□□□ -1.89
NBPF3Q9H094 AL513423.1-201ENST00000621695 132 ntBASIC3.27□□□□□ -1.89
NBPF3Q9H094 SNORD38B-202ENST00000625943 69 ntBASIC3.27□□□□□ -1.89
NBPF3Q9H094 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.26□□□□□ -1.89
NBPF3Q9H094 Y_RNA.36-201ENST00000362602 112 ntBASIC3.26□□□□□ -1.89
NBPF3Q9H094 RNU6-630P-201ENST00000391258 106 ntBASIC3.26□□□□□ -1.89
NBPF3Q9H094 RNA5SP445-201ENST00000515889 115 ntBASIC3.26□□□□□ -1.89
NBPF3Q9H094 RNA5SP24-201ENST00000516478 95 ntBASIC3.26□□□□□ -1.89
NBPF3Q9H094 RNU7-43P-201ENST00000516554 64 ntBASIC3.26□□□□□ -1.89
NBPF3Q9H094 YWHAEP2-201ENST00000580066 112 ntBASIC3.26□□□□□ -1.89
NBPF3Q9H094 YWHAEP3-201ENST00000582767 121 ntBASIC3.26□□□□□ -1.89
NBPF3Q9H094 SNORD92-201ENST00000585078 85 ntBASIC3.26□□□□□ -1.89
NBPF3Q9H094 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.26□□□□□ -1.89
NBPF3Q9H094 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
NBPF3Q9H094 MIR597-201ENST00000384968 97 ntBASIC3.25□□□□□ -1.89
NBPF3Q9H094 AL023284.1-201ENST00000403956 276 ntBASIC3.25□□□□□ -1.89
NBPF3Q9H094 AC092427.1-202ENST00000430569 476 ntBASIC3.25□□□□□ -1.89
NBPF3Q9H094 snoU13.17-201ENST00000458802 104 ntBASIC3.25□□□□□ -1.89
NBPF3Q9H094 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.25□□□□□ -1.89
NBPF3Q9H094 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
NBPF3Q9H094 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.25□□□□□ -1.89
NBPF3Q9H094 RNU6-154P-201ENST00000384306 106 ntBASIC3.24□□□□□ -1.89
NBPF3Q9H094 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
NBPF3Q9H094 RNA5SP21-201ENST00000410917 96 ntBASIC3.24□□□□□ -1.89
NBPF3Q9H094 AC099513.1-201ENST00000490423 301 ntBASIC3.24□□□□□ -1.89
NBPF3Q9H094 RNA5SP437-201ENST00000517249 129 ntBASIC3.24□□□□□ -1.89
NBPF3Q9H094 AC026271.5-201ENST00000577873 130 ntBASIC3.24□□□□□ -1.89
NBPF3Q9H094 SNORD53-201ENST00000579969 78 ntBASIC3.24□□□□□ -1.89
NBPF3Q9H094 AL357312.1-201ENST00000603879 298 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms