Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 Y_RNA.68-201ENST00000362881 102 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 SNORA2.3-201ENST00000383920 135 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 RNU1-109P-201ENST00000383960 147 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR513A1-201ENST00000385138 129 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR493-201ENST00000385254 89 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR196A1-201ENST00000388006 70 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 SNORD41.1-201ENST00000391000 69 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR1182-201ENST00000408363 97 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 RNU2-50P-201ENST00000410494 143 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 RPL35AP4-201ENST00000412007 102 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 AC068138.1-201ENST00000412635 217 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 AL035423.1-201ENST00000420331 213 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 RPS29P9-201ENST00000440360 171 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 AL161788.1-201ENST00000441805 169 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 AC073264.2-201ENST00000448886 166 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 snoU13.1-201ENST00000459157 104 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 SNORD2-201ENST00000459163 69 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 AP004217.1-201ENST00000480579 346 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 AC091912.1-201ENST00000511351 248 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 SNORA70.14-201ENST00000516205 110 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 RNU6-928P-201ENST00000516876 104 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR4277-201ENST00000578298 84 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 AL033523.1-201ENST00000605153 153 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR6853-201ENST00000619642 74 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 AC019206.1-201ENST00000621938 425 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 AC084768.2-201ENST00000622736 221 ntBASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 MED23-203ENST00000368058 4576 ntTSL 5 BASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
KRTAP4-4Q9BYR3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 SNORD18C-201ENST00000362704 69 ntBASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 RNU1-32P-201ENST00000363937 159 ntBASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 SNORD74.4-201ENST00000364129 80 ntBASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 RNU1-59P-201ENST00000364829 162 ntBASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 RNY4P10-201ENST00000365571 96 ntBASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 RNU6-629P-201ENST00000384061 103 ntBASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR659-201ENST00000384963 97 ntBASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 SNORD115-45-201ENST00000391078 81 ntBASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 SNORA77-201ENST00000408716 125 ntBASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 AL732292.1-201ENST00000426692 226 ntBASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 RPL7AP28-201ENST00000464513 571 ntBASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 RN7SL188P-201ENST00000469842 285 ntBASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 Y_RNA.657-201ENST00000515983 102 ntBASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 RNU6-732P-201ENST00000516033 103 ntBASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 AC027667.1-201ENST00000545814 304 ntBASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR4301-201ENST00000577203 66 ntBASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR3667-201ENST00000581025 74 ntBASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR4697-201ENST00000582977 78 ntBASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR4499-201ENST00000584834 69 ntBASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 AL162376.1-201ENST00000624117 175 ntBASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-4Q9BYR3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 RNA5SP453-201ENST00000362503 119 ntBASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 RNU6-1233P-201ENST00000362922 102 ntBASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 RNA5SP331-201ENST00000364986 107 ntBASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 RNU6-608P-201ENST00000383927 104 ntBASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 RNU6-30P-201ENST00000384561 107 ntBASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR496-201ENST00000385226 102 ntBASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR1207-201ENST00000408249 87 ntBASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR1254-1-201ENST00000408257 97 ntBASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 MIR548Q-201ENST00000408404 100 ntBASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 Y_RNA.613-201ENST00000410726 97 ntBASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 Z98742.2-201ENST00000431564 187 ntBASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 snoU13.4-201ENST00000458916 104 ntBASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 RN7SL601P-201ENST00000471221 293 ntBASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 RN7SL814P-201ENST00000487715 300 ntBASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 RN7SL346P-201ENST00000491561 294 ntBASIC0.87□□□□□ -2.27
KRTAP4-4Q9BYR3 RNA5SP112-201ENST00000515937 99 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms