Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AL049779.4-201ENST00000604500 156 ntBASIC0.69□□□□□ -2.3
LCE3DQ9BYE3 RNU6-86P-201ENST00000606534 107 ntBASIC0.69□□□□□ -2.3
LCE3DQ9BYE3 AL512598.1-201ENST00000610158 273 ntBASIC0.69□□□□□ -2.3
LCE3DQ9BYE3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.69□□□□□ -2.3
LCE3DQ9BYE3 MIR6840-201ENST00000611937 71 ntBASIC0.69□□□□□ -2.3
LCE3DQ9BYE3 WARS-244ENST00000627608 123 ntTSL 5 BASIC0.69□□□□□ -2.3
LCE3DQ9BYE3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.69□□□□□ -2.3
LCE3DQ9BYE3 MIR1245B-201ENST00000636115 69 ntBASIC0.69□□□□□ -2.3
LCE3DQ9BYE3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
LCE3DQ9BYE3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 Y_RNA.190-201ENST00000363964 101 ntBASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 RNA5SP138-201ENST00000365098 114 ntBASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 RNU6-53P-201ENST00000365367 106 ntBASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 MIR490-201ENST00000384865 128 ntBASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 MIR7-3-201ENST00000384898 110 ntBASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 MIR934-201ENST00000401241 83 ntBASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 RNU6-592P-201ENST00000411333 103 ntBASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 AC091390.1-201ENST00000433904 331 ntBASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 SPINT5P-201ENST00000448174 155 ntBASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 snoU13.25-201ENST00000458945 104 ntBASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 AC008885.1-201ENST00000514930 301 ntBASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 RNA5SP445-201ENST00000515889 115 ntBASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 RNU6-765P-201ENST00000516916 99 ntBASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 MTND5P40-201ENST00000559945 246 ntBASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 AL513043.2-201ENST00000573941 143 ntBASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 MIR3664-201ENST00000579074 99 ntBASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 AL137847.3-201ENST00000611521 109 ntBASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 MIR8066-201ENST00000617280 78 ntBASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 MIR6516-201ENST00000630554 81 ntBASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
LCE3DQ9BYE3 SNORA54-201ENST00000384281 123 ntBASIC0.67□□□□□ -2.3
LCE3DQ9BYE3 RNU1-78P-201ENST00000391248 165 ntBASIC0.67□□□□□ -2.3
LCE3DQ9BYE3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.67□□□□□ -2.3
LCE3DQ9BYE3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.67□□□□□ -2.3
LCE3DQ9BYE3 BX510359.1-201ENST00000456973 237 ntBASIC0.67□□□□□ -2.3
LCE3DQ9BYE3 Y_RNA.648-201ENST00000459455 110 ntBASIC0.67□□□□□ -2.3
LCE3DQ9BYE3 AC025033.1-201ENST00000463883 194 ntBASIC0.67□□□□□ -2.3
LCE3DQ9BYE3 RNU6-165P-201ENST00000517170 99 ntBASIC0.67□□□□□ -2.3
LCE3DQ9BYE3 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC0.67□□□□□ -2.3
LCE3DQ9BYE3 AL512310.8-201ENST00000550183 120 ntBASIC0.67□□□□□ -2.3
LCE3DQ9BYE3 ELOCP29-201ENST00000588193 334 ntBASIC0.67□□□□□ -2.3
LCE3DQ9BYE3 RNU7-10P-201ENST00000607194 63 ntBASIC0.67□□□□□ -2.3
LCE3DQ9BYE3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC0.67□□□□□ -2.3
LCE3DQ9BYE3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.67□□□□□ -2.3
LCE3DQ9BYE3 AC105081.1-201ENST00000617727 106 ntBASIC0.67□□□□□ -2.3
LCE3DQ9BYE3 U4.3-201ENST00000621047 82 ntBASIC0.67□□□□□ -2.3
LCE3DQ9BYE3 AL355480.1-201ENST00000629041 99 ntBASIC0.67□□□□□ -2.3
LCE3DQ9BYE3 AC006160.2-201ENST00000637708 154 ntBASIC0.67□□□□□ -2.3
LCE3DQ9BYE3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
LCE3DQ9BYE3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
LCE3DQ9BYE3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC0.67□□□□□ -2.3
LCE3DQ9BYE3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
LCE3DQ9BYE3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
LCE3DQ9BYE3 Y_RNA.57-201ENST00000362806 113 ntBASIC0.66□□□□□ -2.3
LCE3DQ9BYE3 RNU4-58P-201ENST00000363192 141 ntBASIC0.66□□□□□ -2.3
LCE3DQ9BYE3 SNORA25.3-201ENST00000363205 127 ntBASIC0.66□□□□□ -2.3
LCE3DQ9BYE3 RNA5SP456-201ENST00000364002 114 ntBASIC0.66□□□□□ -2.3
LCE3DQ9BYE3 RNA5SP37-201ENST00000365420 130 ntBASIC0.66□□□□□ -2.3
LCE3DQ9BYE3 RNU6-1237P-201ENST00000384777 107 ntBASIC0.66□□□□□ -2.3
LCE3DQ9BYE3 MIR554-201ENST00000384874 96 ntBASIC0.66□□□□□ -2.3
LCE3DQ9BYE3 MIR200C-201ENST00000384980 68 ntBASIC0.66□□□□□ -2.3
LCE3DQ9BYE3 MIR181B2-201ENST00000385004 89 ntBASIC0.66□□□□□ -2.3
LCE3DQ9BYE3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
LCE3DQ9BYE3 AL138827.1-201ENST00000402666 306 ntBASIC0.66□□□□□ -2.3
LCE3DQ9BYE3 RNA5SP21-201ENST00000410917 96 ntBASIC0.66□□□□□ -2.3
LCE3DQ9BYE3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.66□□□□□ -2.3
LCE3DQ9BYE3 RPL23AP42-201ENST00000471152 471 ntBASIC0.66□□□□□ -2.3
LCE3DQ9BYE3 RNA5SP282-201ENST00000516355 108 ntBASIC0.66□□□□□ -2.3
LCE3DQ9BYE3 MIR5004-201ENST00000579078 107 ntBASIC0.66□□□□□ -2.3
LCE3DQ9BYE3 AC090897.1-201ENST00000580909 226 ntBASIC0.66□□□□□ -2.3
LCE3DQ9BYE3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC0.66□□□□□ -2.3
LCE3DQ9BYE3 MIR6895-201ENST00000613497 78 ntBASIC0.66□□□□□ -2.3
LCE3DQ9BYE3 MIR8063-201ENST00000621930 81 ntBASIC0.66□□□□□ -2.3
LCE3DQ9BYE3 MIR548BB-201ENST00000626714 66 ntBASIC0.66□□□□□ -2.3
LCE3DQ9BYE3 U6.109-201ENST00000636749 87 ntBASIC0.66□□□□□ -2.3
LCE3DQ9BYE3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
LCE3DQ9BYE3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
LCE3DQ9BYE3 Y_RNA.4-201ENST00000362333 112 ntBASIC0.65□□□□□ -2.31
LCE3DQ9BYE3 RNU6-228P-201ENST00000362700 106 ntBASIC0.65□□□□□ -2.31
LCE3DQ9BYE3 Y_RNA.73-201ENST00000362910 113 ntBASIC0.65□□□□□ -2.31
LCE3DQ9BYE3 Y_RNA.119-201ENST00000363301 96 ntBASIC0.65□□□□□ -2.31
LCE3DQ9BYE3 RNU6-573P-201ENST00000383938 106 ntBASIC0.65□□□□□ -2.31
LCE3DQ9BYE3 RNU6-787P-201ENST00000384032 107 ntBASIC0.65□□□□□ -2.31
LCE3DQ9BYE3 RNU6-1124P-201ENST00000384169 107 ntBASIC0.65□□□□□ -2.31
LCE3DQ9BYE3 RNU6-301P-201ENST00000384277 107 ntBASIC0.65□□□□□ -2.31
LCE3DQ9BYE3 RNY1P4-201ENST00000384595 115 ntBASIC0.65□□□□□ -2.31
LCE3DQ9BYE3 MIR519C-201ENST00000385053 87 ntBASIC0.65□□□□□ -2.31
LCE3DQ9BYE3 MIR9-1-201ENST00000385198 89 ntBASIC0.65□□□□□ -2.31
LCE3DQ9BYE3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
LCE3DQ9BYE3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
LCE3DQ9BYE3 SNORD12-201ENST00000391002 90 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms