Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 RNU6-679P-201ENST00000391003 106 ntBASIC2.25□□□□□ -2.05
SHISA4Q96DD7 MIR1283-2-201ENST00000408621 87 ntBASIC2.25□□□□□ -2.05
SHISA4Q96DD7 MRPL35P3-201ENST00000421557 364 ntBASIC2.25□□□□□ -2.05
SHISA4Q96DD7 RPS29P11-201ENST00000496507 171 ntBASIC2.25□□□□□ -2.05
SHISA4Q96DD7 RNVU1-2-201ENST00000516326 135 ntBASIC2.25□□□□□ -2.05
SHISA4Q96DD7 RNA5SP481-201ENST00000516814 122 ntBASIC2.25□□□□□ -2.05
SHISA4Q96DD7 AC121758.2-201ENST00000553271 193 ntBASIC2.25□□□□□ -2.05
SHISA4Q96DD7 MIR548AR-201ENST00000582191 57 ntBASIC2.25□□□□□ -2.05
SHISA4Q96DD7 AC096720.1-201ENST00000604441 183 ntBASIC2.25□□□□□ -2.05
SHISA4Q96DD7 MIR4791-201ENST00000607666 84 ntBASIC2.25□□□□□ -2.05
SHISA4Q96DD7 Y_RNA.73-201ENST00000362910 113 ntBASIC2.24□□□□□ -2.05
SHISA4Q96DD7 RNA5SP138-201ENST00000365098 114 ntBASIC2.24□□□□□ -2.05
SHISA4Q96DD7 MIR518A2-201ENST00000384966 87 ntBASIC2.24□□□□□ -2.05
SHISA4Q96DD7 SNORA26.6-201ENST00000391256 115 ntBASIC2.24□□□□□ -2.05
SHISA4Q96DD7 SNORD123-201ENST00000459473 70 ntBASIC2.24□□□□□ -2.05
SHISA4Q96DD7 SUB1P4-201ENST00000566062 339 ntBASIC2.24□□□□□ -2.05
SHISA4Q96DD7 MIR4303-201ENST00000581299 66 ntBASIC2.24□□□□□ -2.05
SHISA4Q96DD7 IGLL4P-201ENST00000614590 133 ntBASIC2.24□□□□□ -2.05
SHISA4Q96DD7 U7.3-201ENST00000616123 62 ntBASIC2.24□□□□□ -2.05
SHISA4Q96DD7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SHISA4Q96DD7 RNU6-60P-201ENST00000364792 103 ntBASIC2.23□□□□□ -2.05
SHISA4Q96DD7 MIR660-201ENST00000385235 97 ntBASIC2.23□□□□□ -2.05
SHISA4Q96DD7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
SHISA4Q96DD7 AL445685.2-201ENST00000422551 342 ntBASIC2.23□□□□□ -2.05
SHISA4Q96DD7 snoU13.27-201ENST00000459278 104 ntBASIC2.23□□□□□ -2.05
SHISA4Q96DD7 AC022137.1-201ENST00000483735 151 ntBASIC2.23□□□□□ -2.05
SHISA4Q96DD7 Y_RNA.659-201ENST00000515994 113 ntBASIC2.23□□□□□ -2.05
SHISA4Q96DD7 AL020996.3-201ENST00000606617 222 ntBASIC2.23□□□□□ -2.05
SHISA4Q96DD7 AC021506.2-201ENST00000612354 169 ntBASIC2.23□□□□□ -2.05
SHISA4Q96DD7 SNORD3E-202ENST00000627253 216 ntBASIC2.23□□□□□ -2.05
SHISA4Q96DD7 AL512310.12-203ENST00000640543 90 ntBASIC2.23□□□□□ -2.05
SHISA4Q96DD7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SHISA4Q96DD7 Y_RNA.95-201ENST00000363079 95 ntBASIC2.22□□□□□ -2.05
SHISA4Q96DD7 SNORA3A-201ENST00000364113 130 ntBASIC2.22□□□□□ -2.05
SHISA4Q96DD7 RNU6-1201P-201ENST00000384227 107 ntBASIC2.22□□□□□ -2.05
SHISA4Q96DD7 Y_RNA.537-201ENST00000384626 109 ntBASIC2.22□□□□□ -2.05
SHISA4Q96DD7 MIR1276-201ENST00000408707 83 ntBASIC2.22□□□□□ -2.05
SHISA4Q96DD7 AL353813.1-201ENST00000440700 253 ntBASIC2.22□□□□□ -2.05
SHISA4Q96DD7 AC090255.1-201ENST00000495779 349 ntBASIC2.22□□□□□ -2.05
SHISA4Q96DD7 RNU6-162P-201ENST00000516228 103 ntBASIC2.22□□□□□ -2.05
SHISA4Q96DD7 Y_RNA.705-201ENST00000516862 110 ntBASIC2.22□□□□□ -2.05
SHISA4Q96DD7 RNA5SP437-201ENST00000517249 129 ntBASIC2.22□□□□□ -2.05
SHISA4Q96DD7 AC022254.1-201ENST00000567857 235 ntBASIC2.22□□□□□ -2.05
SHISA4Q96DD7 BX248123.2-201ENST00000606318 124 ntBASIC2.22□□□□□ -2.05
SHISA4Q96DD7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
SHISA4Q96DD7 RNU6-112P-201ENST00000363599 104 ntBASIC2.21□□□□□ -2.06
SHISA4Q96DD7 RNY1P1-201ENST00000364372 112 ntBASIC2.21□□□□□ -2.06
SHISA4Q96DD7 RNU6-497P-201ENST00000365316 104 ntBASIC2.21□□□□□ -2.06
SHISA4Q96DD7 SNORD28B-201ENST00000390993 75 ntBASIC2.21□□□□□ -2.06
SHISA4Q96DD7 AL451046.2-201ENST00000403074 277 ntBASIC2.21□□□□□ -2.06
SHISA4Q96DD7 SNORD23.1-201ENST00000408212 104 ntBASIC2.21□□□□□ -2.06
SHISA4Q96DD7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.21□□□□□ -2.06
SHISA4Q96DD7 RPL39P39-201ENST00000455840 151 ntBASIC2.21□□□□□ -2.06
SHISA4Q96DD7 MIR4777-201ENST00000583710 86 ntBASIC2.21□□□□□ -2.06
SHISA4Q96DD7 U1.36-201ENST00000620684 176 ntBASIC2.21□□□□□ -2.06
SHISA4Q96DD7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
SHISA4Q96DD7 Y_RNA.313-201ENST00000365095 103 ntBASIC2.2□□□□□ -2.06
SHISA4Q96DD7 SNORA32-201ENST00000384072 121 ntBASIC2.2□□□□□ -2.06
SHISA4Q96DD7 RNU6-296P-201ENST00000384608 107 ntBASIC2.2□□□□□ -2.06
SHISA4Q96DD7 MIR9-3-201ENST00000385084 90 ntBASIC2.2□□□□□ -2.06
SHISA4Q96DD7 RNU6-913P-201ENST00000390913 95 ntBASIC2.2□□□□□ -2.06
SHISA4Q96DD7 HMGN2P39-201ENST00000398005 273 ntBASIC2.2□□□□□ -2.06
SHISA4Q96DD7 snoU13.16-201ENST00000459350 104 ntBASIC2.2□□□□□ -2.06
SHISA4Q96DD7 AC079804.2-201ENST00000490376 200 ntBASIC2.2□□□□□ -2.06
SHISA4Q96DD7 SNORA25.15-201ENST00000516487 89 ntBASIC2.2□□□□□ -2.06
SHISA4Q96DD7 MIR4439-201ENST00000583746 80 ntBASIC2.2□□□□□ -2.06
SHISA4Q96DD7 MIR548Z-201ENST00000584743 97 ntBASIC2.2□□□□□ -2.06
SHISA4Q96DD7 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.2□□□□□ -2.06
SHISA4Q96DD7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.2□□□□□ -2.06
SHISA4Q96DD7 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SHISA4Q96DD7 RNU6-1313P-201ENST00000362622 102 ntBASIC2.19□□□□□ -2.06
SHISA4Q96DD7 SNORA1.1-201ENST00000364671 133 ntBASIC2.19□□□□□ -2.06
SHISA4Q96DD7 Y_RNA.354-201ENST00000365448 111 ntBASIC2.19□□□□□ -2.06
SHISA4Q96DD7 MIR144-201ENST00000384886 86 ntBASIC2.19□□□□□ -2.06
SHISA4Q96DD7 MIR526A1-201ENST00000384897 85 ntBASIC2.19□□□□□ -2.06
SHISA4Q96DD7 RNU6-1190P-201ENST00000410811 104 ntBASIC2.19□□□□□ -2.06
SHISA4Q96DD7 RNA5SP501-201ENST00000410990 112 ntBASIC2.19□□□□□ -2.06
SHISA4Q96DD7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.19□□□□□ -2.06
SHISA4Q96DD7 MIR424-201ENST00000362227 98 ntBASIC2.18□□□□□ -2.06
SHISA4Q96DD7 SNORD115-35-201ENST00000365122 82 ntBASIC2.18□□□□□ -2.06
SHISA4Q96DD7 RNU6-1276P-201ENST00000365372 104 ntBASIC2.18□□□□□ -2.06
SHISA4Q96DD7 RNU6-887P-201ENST00000410660 100 ntBASIC2.18□□□□□ -2.06
SHISA4Q96DD7 RPL23AP6-201ENST00000446637 472 ntBASIC2.18□□□□□ -2.06
SHISA4Q96DD7 MIR1270-201ENST00000459320 83 ntBASIC2.18□□□□□ -2.06
SHISA4Q96DD7 SNORA74.3-201ENST00000517108 154 ntBASIC2.18□□□□□ -2.06
SHISA4Q96DD7 FAM106DP-201ENST00000586416 501 ntBASIC2.18□□□□□ -2.06
SHISA4Q96DD7 MIR6840-201ENST00000611937 71 ntBASIC2.18□□□□□ -2.06
SHISA4Q96DD7 AC084768.2-201ENST00000622736 221 ntBASIC2.18□□□□□ -2.06
SHISA4Q96DD7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.18□□□□□ -2.06
SHISA4Q96DD7 AC091304.10-201ENST00000641554 121 ntBASIC2.18□□□□□ -2.06
SHISA4Q96DD7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
SHISA4Q96DD7 RNA5SP37-201ENST00000365420 130 ntBASIC2.17□□□□□ -2.06
SHISA4Q96DD7 RNU6-242P-201ENST00000384359 107 ntBASIC2.17□□□□□ -2.06
SHISA4Q96DD7 SNORD116-22-201ENST00000384430 92 ntBASIC2.17□□□□□ -2.06
SHISA4Q96DD7 AC099513.1-201ENST00000490423 301 ntBASIC2.17□□□□□ -2.06
SHISA4Q96DD7 RNU6-267P-201ENST00000516714 103 ntBASIC2.17□□□□□ -2.06
SHISA4Q96DD7 MIR8081-201ENST00000611533 95 ntBASIC2.17□□□□□ -2.06
SHISA4Q96DD7 MIR6504-201ENST00000613520 61 ntBASIC2.17□□□□□ -2.06
SHISA4Q96DD7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.17□□□□□ -2.06
SHISA4Q96DD7 MIR3202-2-201ENST00000635980 79 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms