Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 RNU6-1254P-201ENST00000391266 104 ntBASIC2.87□□□□□ -1.95
SNIP1Q8TAD8 MIR887-201ENST00000401258 79 ntBASIC2.87□□□□□ -1.95
SNIP1Q8TAD8 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.87□□□□□ -1.95
SNIP1Q8TAD8 RNA5SP385-201ENST00000515947 110 ntBASIC2.87□□□□□ -1.95
SNIP1Q8TAD8 RNA5SP217-201ENST00000515959 91 ntBASIC2.87□□□□□ -1.95
SNIP1Q8TAD8 MIR4709-201ENST00000577272 72 ntBASIC2.87□□□□□ -1.95
SNIP1Q8TAD8 MIR3616-201ENST00000584070 92 ntBASIC2.87□□□□□ -1.95
SNIP1Q8TAD8 AL357312.1-201ENST00000603879 298 ntBASIC2.87□□□□□ -1.95
SNIP1Q8TAD8 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
SNIP1Q8TAD8 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SNIP1Q8TAD8 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
SNIP1Q8TAD8 Y_RNA.119-201ENST00000363301 96 ntBASIC2.86□□□□□ -1.95
SNIP1Q8TAD8 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SNIP1Q8TAD8 RNU11-3P-201ENST00000391111 133 ntBASIC2.86□□□□□ -1.95
SNIP1Q8TAD8 RNU6-243P-201ENST00000391140 107 ntBASIC2.86□□□□□ -1.95
SNIP1Q8TAD8 RN7SKP123-201ENST00000410732 291 ntBASIC2.86□□□□□ -1.95
SNIP1Q8TAD8 RNA5SP344-201ENST00000411081 104 ntBASIC2.86□□□□□ -1.95
SNIP1Q8TAD8 RNA5SP445-201ENST00000515889 115 ntBASIC2.86□□□□□ -1.95
SNIP1Q8TAD8 AC107016.2-201ENST00000547968 190 ntBASIC2.86□□□□□ -1.95
SNIP1Q8TAD8 SNORD92-201ENST00000585078 85 ntBASIC2.86□□□□□ -1.95
SNIP1Q8TAD8 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.86□□□□□ -1.95
SNIP1Q8TAD8 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SNIP1Q8TAD8 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SNIP1Q8TAD8 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
SNIP1Q8TAD8 MIR520A-201ENST00000384862 85 ntBASIC2.85□□□□□ -1.95
SNIP1Q8TAD8 SNORD67-201ENST00000390833 111 ntBASIC2.85□□□□□ -1.95
SNIP1Q8TAD8 HMGN2P39-201ENST00000398005 273 ntBASIC2.85□□□□□ -1.95
SNIP1Q8TAD8 RNVU1-2-201ENST00000516326 135 ntBASIC2.85□□□□□ -1.95
SNIP1Q8TAD8 MIR4251-201ENST00000635819 61 ntBASIC2.85□□□□□ -1.95
SNIP1Q8TAD8 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SNIP1Q8TAD8 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
SNIP1Q8TAD8 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.84□□□□□ -1.95
SNIP1Q8TAD8 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
SNIP1Q8TAD8 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SNIP1Q8TAD8 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.84□□□□□ -1.95
SNIP1Q8TAD8 AC104332.2-201ENST00000429959 156 ntBASIC2.84□□□□□ -1.95
SNIP1Q8TAD8 snoU13.17-201ENST00000458802 104 ntBASIC2.84□□□□□ -1.95
SNIP1Q8TAD8 MIR3935-201ENST00000583472 104 ntBASIC2.84□□□□□ -1.95
SNIP1Q8TAD8 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.84□□□□□ -1.96
SNIP1Q8TAD8 AC108206.1-201ENST00000570186 4159 ntBASIC2.84□□□□□ -1.96
SNIP1Q8TAD8 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
SNIP1Q8TAD8 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
SNIP1Q8TAD8 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
SNIP1Q8TAD8 MIR424-201ENST00000362227 98 ntBASIC2.83□□□□□ -1.96
SNIP1Q8TAD8 Y_RNA.36-201ENST00000362602 112 ntBASIC2.83□□□□□ -1.96
SNIP1Q8TAD8 SNORA70B-201ENST00000384210 135 ntBASIC2.83□□□□□ -1.96
SNIP1Q8TAD8 RNU6-141P-201ENST00000410499 105 ntBASIC2.83□□□□□ -1.96
SNIP1Q8TAD8 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.83□□□□□ -1.96
SNIP1Q8TAD8 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
SNIP1Q8TAD8 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SNIP1Q8TAD8 MIR518E-201ENST00000385252 88 ntBASIC2.82□□□□□ -1.96
SNIP1Q8TAD8 RNU6-466P-201ENST00000391224 103 ntBASIC2.82□□□□□ -1.96
SNIP1Q8TAD8 AC244023.1-201ENST00000426884 112 ntBASIC2.82□□□□□ -1.96
SNIP1Q8TAD8 AC087499.2-201ENST00000432861 149 ntBASIC2.82□□□□□ -1.96
SNIP1Q8TAD8 snoU13.27-201ENST00000459278 104 ntBASIC2.82□□□□□ -1.96
SNIP1Q8TAD8 SUB1P4-201ENST00000566062 339 ntBASIC2.82□□□□□ -1.96
SNIP1Q8TAD8 AC242498.1-201ENST00000604134 111 ntBASIC2.82□□□□□ -1.96
SNIP1Q8TAD8 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
SNIP1Q8TAD8 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SNIP1Q8TAD8 RNU6-154P-201ENST00000384306 106 ntBASIC2.81□□□□□ -1.96
SNIP1Q8TAD8 RNU6-630P-201ENST00000391258 106 ntBASIC2.81□□□□□ -1.96
SNIP1Q8TAD8 MIR942-201ENST00000401111 86 ntBASIC2.81□□□□□ -1.96
SNIP1Q8TAD8 AC245517.4-201ENST00000448601 281 ntBASIC2.81□□□□□ -1.96
SNIP1Q8TAD8 snoU13.2-201ENST00000459201 104 ntBASIC2.81□□□□□ -1.96
SNIP1Q8TAD8 RNU1-41P-201ENST00000516161 162 ntBASIC2.81□□□□□ -1.96
SNIP1Q8TAD8 RNU1-48P-201ENST00000516400 162 ntBASIC2.81□□□□□ -1.96
SNIP1Q8TAD8 MIR2276-201ENST00000516886 89 ntBASIC2.81□□□□□ -1.96
SNIP1Q8TAD8 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.81□□□□□ -1.96
SNIP1Q8TAD8 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SNIP1Q8TAD8 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.81□□□□□ -1.96
SNIP1Q8TAD8 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
SNIP1Q8TAD8 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SNIP1Q8TAD8 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.8□□□□□ -1.96
SNIP1Q8TAD8 RNU7-106P-201ENST00000459514 67 ntBASIC2.8□□□□□ -1.96
SNIP1Q8TAD8 RNU7-41P-201ENST00000515917 61 ntBASIC2.8□□□□□ -1.96
SNIP1Q8TAD8 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.8□□□□□ -1.96
SNIP1Q8TAD8 AL161431.1-201ENST00000618966 4205 ntBASIC2.8□□□□□ -1.96
SNIP1Q8TAD8 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.8□□□□□ -1.96
SNIP1Q8TAD8 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SNIP1Q8TAD8 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SNIP1Q8TAD8 AC073325.2-201ENST00000339545 159 ntBASIC2.79□□□□□ -1.96
SNIP1Q8TAD8 RNU6-957P-201ENST00000363652 99 ntBASIC2.79□□□□□ -1.96
SNIP1Q8TAD8 Y_RNA.371-201ENST00000365591 113 ntBASIC2.79□□□□□ -1.96
SNIP1Q8TAD8 MIR196B-201ENST00000384852 84 ntBASIC2.79□□□□□ -1.96
SNIP1Q8TAD8 MIR588-201ENST00000384900 83 ntBASIC2.79□□□□□ -1.96
SNIP1Q8TAD8 AC244636.1-201ENST00000421152 228 ntBASIC2.79□□□□□ -1.96
SNIP1Q8TAD8 Z96811.1-201ENST00000445880 108 ntBASIC2.79□□□□□ -1.96
SNIP1Q8TAD8 SNORD109B-201ENST00000458961 67 ntBASIC2.79□□□□□ -1.96
SNIP1Q8TAD8 SNORD109A-201ENST00000459128 67 ntBASIC2.79□□□□□ -1.96
SNIP1Q8TAD8 MIR7843-201ENST00000622274 79 ntBASIC2.79□□□□□ -1.96
SNIP1Q8TAD8 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SNIP1Q8TAD8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
SNIP1Q8TAD8 MIR1283-2-201ENST00000408621 87 ntBASIC2.78□□□□□ -1.96
SNIP1Q8TAD8 HMGN2P3-201ENST00000433603 273 ntBASIC2.78□□□□□ -1.96
SNIP1Q8TAD8 HMGN2P5-201ENST00000436882 273 ntBASIC2.78□□□□□ -1.96
SNIP1Q8TAD8 AL513328.1-201ENST00000446460 224 ntBASIC2.78□□□□□ -1.96
SNIP1Q8TAD8 AC009474.2-201ENST00000451383 136 ntBASIC2.78□□□□□ -1.96
SNIP1Q8TAD8 UQCRHP3-201ENST00000451503 251 ntBASIC2.78□□□□□ -1.96
SNIP1Q8TAD8 AC079600.2-201ENST00000550076 130 ntBASIC2.78□□□□□ -1.96
SNIP1Q8TAD8 AL096861.1-201ENST00000610899 123 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms