Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RNU6-521P-201ENST00000516663 105 ntBASIC2.38□□□□□ -2.03
NPAS4Q8IUM7 MIR548AR-201ENST00000582191 57 ntBASIC2.38□□□□□ -2.03
NPAS4Q8IUM7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.38□□□□□ -2.03
NPAS4Q8IUM7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.37□□□□□ -2.03
NPAS4Q8IUM7 RNY1P1-201ENST00000364372 112 ntBASIC2.37□□□□□ -2.03
NPAS4Q8IUM7 SNORA32-201ENST00000384072 121 ntBASIC2.37□□□□□ -2.03
NPAS4Q8IUM7 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.37□□□□□ -2.03
NPAS4Q8IUM7 RNA5SP261-201ENST00000410536 106 ntBASIC2.37□□□□□ -2.03
NPAS4Q8IUM7 AC109327.2-201ENST00000448339 378 ntBASIC2.37□□□□□ -2.03
NPAS4Q8IUM7 AC022137.1-201ENST00000483735 151 ntBASIC2.37□□□□□ -2.03
NPAS4Q8IUM7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.37□□□□□ -2.03
NPAS4Q8IUM7 IGLL4P-201ENST00000614590 133 ntBASIC2.37□□□□□ -2.03
NPAS4Q8IUM7 MIR6841-201ENST00000637129 72 ntBASIC2.37□□□□□ -2.03
NPAS4Q8IUM7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NPAS4Q8IUM7 Y_RNA.73-201ENST00000362910 113 ntBASIC2.36□□□□□ -2.03
NPAS4Q8IUM7 RNU6-1201P-201ENST00000384227 107 ntBASIC2.36□□□□□ -2.03
NPAS4Q8IUM7 Y_RNA.467-201ENST00000384297 102 ntBASIC2.36□□□□□ -2.03
NPAS4Q8IUM7 SNORD77B-201ENST00000391112 67 ntBASIC2.36□□□□□ -2.03
NPAS4Q8IUM7 Y_RNA.659-201ENST00000515994 113 ntBASIC2.36□□□□□ -2.03
NPAS4Q8IUM7 SNORD111.1-201ENST00000516421 86 ntBASIC2.36□□□□□ -2.03
NPAS4Q8IUM7 MIR4764-201ENST00000580680 88 ntBASIC2.36□□□□□ -2.03
NPAS4Q8IUM7 AC243994.1-201ENST00000618627 109 ntBASIC2.36□□□□□ -2.03
NPAS4Q8IUM7 MIR6717-201ENST00000622747 73 ntBASIC2.36□□□□□ -2.03
NPAS4Q8IUM7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
NPAS4Q8IUM7 RNU6-228P-201ENST00000362700 106 ntBASIC2.35□□□□□ -2.03
NPAS4Q8IUM7 SNORD45B-201ENST00000364617 72 ntBASIC2.35□□□□□ -2.03
NPAS4Q8IUM7 MRPL35P3-201ENST00000421557 364 ntBASIC2.35□□□□□ -2.03
NPAS4Q8IUM7 AC079140.2-201ENST00000506193 142 ntBASIC2.35□□□□□ -2.03
NPAS4Q8IUM7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.35□□□□□ -2.03
NPAS4Q8IUM7 AL512310.12-203ENST00000640543 90 ntBASIC2.35□□□□□ -2.03
NPAS4Q8IUM7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
NPAS4Q8IUM7 Y_RNA.95-201ENST00000363079 95 ntBASIC2.34□□□□□ -2.03
NPAS4Q8IUM7 RNA5SP99-201ENST00000364020 114 ntBASIC2.34□□□□□ -2.03
NPAS4Q8IUM7 RNU6-497P-201ENST00000365316 104 ntBASIC2.34□□□□□ -2.03
NPAS4Q8IUM7 SNORA24-201ENST00000384096 131 ntBASIC2.34□□□□□ -2.03
NPAS4Q8IUM7 HMGN1P33-201ENST00000432945 451 ntBASIC2.34□□□□□ -2.03
NPAS4Q8IUM7 RPL39P39-201ENST00000455840 151 ntBASIC2.34□□□□□ -2.03
NPAS4Q8IUM7 RNU6-922P-201ENST00000516753 99 ntBASIC2.34□□□□□ -2.03
NPAS4Q8IUM7 DNAJC19P9-201ENST00000555084 351 ntBASIC2.34□□□□□ -2.03
NPAS4Q8IUM7 MIR3670-2-201ENST00000582974 65 ntBASIC2.34□□□□□ -2.03
NPAS4Q8IUM7 MIR3670-1-201ENST00000584160 65 ntBASIC2.34□□□□□ -2.03
NPAS4Q8IUM7 MIR3670-3-201ENST00000584855 65 ntBASIC2.34□□□□□ -2.03
NPAS4Q8IUM7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.34□□□□□ -2.03
NPAS4Q8IUM7 AL020996.3-201ENST00000606617 222 ntBASIC2.34□□□□□ -2.03
NPAS4Q8IUM7 MIR3670-4-201ENST00000612260 65 ntBASIC2.34□□□□□ -2.03
NPAS4Q8IUM7 AC008133.2-201ENST00000624540 351 ntBASIC2.34□□□□□ -2.03
NPAS4Q8IUM7 RNA5SP48-201ENST00000363969 126 ntBASIC2.33□□□□□ -2.04
NPAS4Q8IUM7 Y_RNA.377-201ENST00000365644 108 ntBASIC2.33□□□□□ -2.04
NPAS4Q8IUM7 RNU6-1124P-201ENST00000384169 107 ntBASIC2.33□□□□□ -2.04
NPAS4Q8IUM7 SNORA48.3-201ENST00000391081 134 ntBASIC2.33□□□□□ -2.04
NPAS4Q8IUM7 RNA5SP225-201ENST00000410874 135 ntBASIC2.33□□□□□ -2.04
NPAS4Q8IUM7 AL603825.1-201ENST00000438481 80 ntBASIC2.33□□□□□ -2.04
NPAS4Q8IUM7 AC008834.1-201ENST00000511612 175 ntBASIC2.33□□□□□ -2.04
NPAS4Q8IUM7 RNU6-1018P-201ENST00000516577 106 ntBASIC2.33□□□□□ -2.04
NPAS4Q8IUM7 RNU6-548P-201ENST00000517083 115 ntBASIC2.33□□□□□ -2.04
NPAS4Q8IUM7 GHRLOS.1-201ENST00000610995 70 ntBASIC2.33□□□□□ -2.04
NPAS4Q8IUM7 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.33□□□□□ -2.04
NPAS4Q8IUM7 AL359851.1-201ENST00000569460 4997 ntBASIC2.33□□□□□ -2.04
NPAS4Q8IUM7 ZNF355P-201ENST00000427301 3216 ntBASIC2.32□□□□□ -2.04
NPAS4Q8IUM7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
NPAS4Q8IUM7 Y_RNA.430-201ENST00000384081 110 ntBASIC2.32□□□□□ -2.04
NPAS4Q8IUM7 RPL30P7-201ENST00000479312 323 ntBASIC2.32□□□□□ -2.04
NPAS4Q8IUM7 RNU6-267P-201ENST00000516714 103 ntBASIC2.32□□□□□ -2.04
NPAS4Q8IUM7 MIR3937-201ENST00000580135 106 ntBASIC2.32□□□□□ -2.04
NPAS4Q8IUM7 AL353997.5-201ENST00000618886 171 ntBASIC2.32□□□□□ -2.04
NPAS4Q8IUM7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NPAS4Q8IUM7 DEFA7P-201ENST00000382676 285 ntBASIC2.31□□□□□ -2.04
NPAS4Q8IUM7 RNU6-972P-201ENST00000391208 107 ntBASIC2.31□□□□□ -2.04
NPAS4Q8IUM7 MIR1255A-201ENST00000408338 113 ntBASIC2.31□□□□□ -2.04
NPAS4Q8IUM7 RNU6-402P-201ENST00000410678 103 ntBASIC2.31□□□□□ -2.04
NPAS4Q8IUM7 RNU7-73P-201ENST00000458743 63 ntBASIC2.31□□□□□ -2.04
NPAS4Q8IUM7 snoU13.16-201ENST00000459350 104 ntBASIC2.31□□□□□ -2.04
NPAS4Q8IUM7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NPAS4Q8IUM7 RNU6-1313P-201ENST00000362622 102 ntBASIC2.3□□□□□ -2.04
NPAS4Q8IUM7 Y_RNA.247-201ENST00000364500 92 ntBASIC2.3□□□□□ -2.04
NPAS4Q8IUM7 U8.13-201ENST00000390842 128 ntBASIC2.3□□□□□ -2.04
NPAS4Q8IUM7 AC005908.1-201ENST00000468701 347 ntBASIC2.3□□□□□ -2.04
NPAS4Q8IUM7 Y_RNA.705-201ENST00000516862 110 ntBASIC2.3□□□□□ -2.04
NPAS4Q8IUM7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.3□□□□□ -2.04
NPAS4Q8IUM7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.3□□□□□ -2.04
NPAS4Q8IUM7 MIR4422-201ENST00000581938 83 ntBASIC2.3□□□□□ -2.04
NPAS4Q8IUM7 MIR376B-201ENST00000614515 100 ntBASIC2.3□□□□□ -2.04
NPAS4Q8IUM7 SNORD115-35-201ENST00000365122 82 ntBASIC2.29□□□□□ -2.04
NPAS4Q8IUM7 RNU6-1276P-201ENST00000365372 104 ntBASIC2.29□□□□□ -2.04
NPAS4Q8IUM7 RNU6-342P-201ENST00000384521 104 ntBASIC2.29□□□□□ -2.04
NPAS4Q8IUM7 RNU6-887P-201ENST00000410660 100 ntBASIC2.29□□□□□ -2.04
NPAS4Q8IUM7 UBL5P1-201ENST00000507979 193 ntBASIC2.29□□□□□ -2.04
NPAS4Q8IUM7 AC108729.3-201ENST00000513484 108 ntBASIC2.29□□□□□ -2.04
NPAS4Q8IUM7 SNORA31.11-201ENST00000516528 139 ntBASIC2.29□□□□□ -2.04
NPAS4Q8IUM7 RNU6-295P-201ENST00000516901 104 ntBASIC2.29□□□□□ -2.04
NPAS4Q8IUM7 RNU6-250P-201ENST00000516958 103 ntBASIC2.29□□□□□ -2.04
NPAS4Q8IUM7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
NPAS4Q8IUM7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.28□□□□□ -2.04
NPAS4Q8IUM7 SNORA1.1-201ENST00000364671 133 ntBASIC2.28□□□□□ -2.04
NPAS4Q8IUM7 SNORD1A-201ENST00000364968 72 ntBASIC2.28□□□□□ -2.04
NPAS4Q8IUM7 RNU6-675P-201ENST00000384236 104 ntBASIC2.28□□□□□ -2.04
NPAS4Q8IUM7 SNORD116-22-201ENST00000384430 92 ntBASIC2.28□□□□□ -2.04
NPAS4Q8IUM7 RNU6-1307P-201ENST00000391012 103 ntBASIC2.28□□□□□ -2.04
NPAS4Q8IUM7 SNORA26.9-201ENST00000391322 122 ntBASIC2.28□□□□□ -2.04
NPAS4Q8IUM7 RNU2-40P-201ENST00000410833 196 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 228.1 ms