Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 SNORD28B-201ENST00000390993 75 ntBASIC3.25□□□□□ -1.89
TRAF7Q6Q0C0 RNA5SP109-201ENST00000391010 116 ntBASIC3.25□□□□□ -1.89
TRAF7Q6Q0C0 RNA5SP184-201ENST00000411071 108 ntBASIC3.25□□□□□ -1.89
TRAF7Q6Q0C0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.25□□□□□ -1.89
TRAF7Q6Q0C0 AC022018.1-201ENST00000430685 241 ntBASIC3.25□□□□□ -1.89
TRAF7Q6Q0C0 AC104389.3-201ENST00000445629 235 ntBASIC3.25□□□□□ -1.89
TRAF7Q6Q0C0 SCARNA21.1-201ENST00000515996 128 ntBASIC3.25□□□□□ -1.89
TRAF7Q6Q0C0 AC019176.1-201ENST00000518519 225 ntBASIC3.25□□□□□ -1.89
TRAF7Q6Q0C0 MIR3126-201ENST00000577443 74 ntBASIC3.25□□□□□ -1.89
TRAF7Q6Q0C0 MIR548AR-201ENST00000582191 57 ntBASIC3.25□□□□□ -1.89
TRAF7Q6Q0C0 U4.3-201ENST00000621047 82 ntBASIC3.25□□□□□ -1.89
TRAF7Q6Q0C0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
TRAF7Q6Q0C0 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.25□□□□□ -1.89
TRAF7Q6Q0C0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TRAF7Q6Q0C0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRAF7Q6Q0C0 RNU6-950P-201ENST00000384651 107 ntBASIC3.24□□□□□ -1.89
TRAF7Q6Q0C0 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TRAF7Q6Q0C0 AC092427.1-202ENST00000430569 476 ntBASIC3.24□□□□□ -1.89
TRAF7Q6Q0C0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.24□□□□□ -1.89
TRAF7Q6Q0C0 RNA5SP147-201ENST00000516493 109 ntBASIC3.24□□□□□ -1.89
TRAF7Q6Q0C0 MIR8054-201ENST00000620877 86 ntBASIC3.24□□□□□ -1.89
TRAF7Q6Q0C0 SNORA50A-202ENST00000629536 136 ntBASIC3.24□□□□□ -1.89
TRAF7Q6Q0C0 RNU1-91P-201ENST00000364746 163 ntBASIC3.23□□□□□ -1.89
TRAF7Q6Q0C0 AC097510.1-201ENST00000510945 133 ntBASIC3.23□□□□□ -1.89
TRAF7Q6Q0C0 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.23□□□□□ -1.89
TRAF7Q6Q0C0 RNU6-122P-201ENST00000516818 107 ntBASIC3.23□□□□□ -1.89
TRAF7Q6Q0C0 RNU2-19P-201ENST00000517288 84 ntBASIC3.23□□□□□ -1.89
TRAF7Q6Q0C0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.23□□□□□ -1.89
TRAF7Q6Q0C0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRAF7Q6Q0C0 RNU6-851P-201ENST00000384565 107 ntBASIC3.22□□□□□ -1.89
TRAF7Q6Q0C0 MIR516B2-201ENST00000385190 85 ntBASIC3.22□□□□□ -1.89
TRAF7Q6Q0C0 RNU6-930P-201ENST00000390938 100 ntBASIC3.22□□□□□ -1.89
TRAF7Q6Q0C0 AC093850.1-201ENST00000454121 251 ntBASIC3.22□□□□□ -1.89
TRAF7Q6Q0C0 RNU6ATAC14P-201ENST00000516218 91 ntBASIC3.22□□□□□ -1.89
TRAF7Q6Q0C0 RNA5SP380-201ENST00000517190 98 ntBASIC3.22□□□□□ -1.89
TRAF7Q6Q0C0 AC138749.4-201ENST00000563970 127 ntBASIC3.22□□□□□ -1.89
TRAF7Q6Q0C0 MIR5089-201ENST00000580047 84 ntBASIC3.22□□□□□ -1.89
TRAF7Q6Q0C0 DLEU2_3.2-201ENST00000612883 73 ntBASIC3.22□□□□□ -1.89
TRAF7Q6Q0C0 uc_338.10-201ENST00000621872 182 ntBASIC3.22□□□□□ -1.89
TRAF7Q6Q0C0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRAF7Q6Q0C0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRAF7Q6Q0C0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRAF7Q6Q0C0 RNU6-668P-201ENST00000364180 107 ntBASIC3.21□□□□□ -1.9
TRAF7Q6Q0C0 SNORA16B-201ENST00000364674 135 ntBASIC3.21□□□□□ -1.9
TRAF7Q6Q0C0 RNY4P3-201ENST00000365254 95 ntBASIC3.21□□□□□ -1.9
TRAF7Q6Q0C0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TRAF7Q6Q0C0 MIR548F3-201ENST00000408509 87 ntBASIC3.21□□□□□ -1.9
TRAF7Q6Q0C0 RNU6-980P-201ENST00000516925 103 ntBASIC3.21□□□□□ -1.9
TRAF7Q6Q0C0 Z97988.1-201ENST00000637697 135 ntBASIC3.21□□□□□ -1.9
TRAF7Q6Q0C0 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.21□□□□□ -1.9
TRAF7Q6Q0C0 WWP1P1-201ENST00000466609 2769 ntBASIC3.21□□□□□ -1.9
TRAF7Q6Q0C0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRAF7Q6Q0C0 RNA5SP383-201ENST00000362934 120 ntBASIC3.2□□□□□ -1.9
TRAF7Q6Q0C0 AL034345.1-201ENST00000407768 123 ntBASIC3.2□□□□□ -1.9
TRAF7Q6Q0C0 Z96811.1-201ENST00000445880 108 ntBASIC3.2□□□□□ -1.9
TRAF7Q6Q0C0 AC245517.4-201ENST00000448601 281 ntBASIC3.2□□□□□ -1.9
TRAF7Q6Q0C0 HMGN1P18-201ENST00000457642 277 ntBASIC3.2□□□□□ -1.9
TRAF7Q6Q0C0 RNU7-106P-201ENST00000459514 67 ntBASIC3.2□□□□□ -1.9
TRAF7Q6Q0C0 SNORA64.4-201ENST00000516632 81 ntBASIC3.2□□□□□ -1.9
TRAF7Q6Q0C0 RNA5SP168-201ENST00000516642 112 ntBASIC3.2□□□□□ -1.9
TRAF7Q6Q0C0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRAF7Q6Q0C0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRAF7Q6Q0C0 RNU6-833P-201ENST00000363486 107 ntBASIC3.19□□□□□ -1.9
TRAF7Q6Q0C0 snoU13.16-201ENST00000459350 104 ntBASIC3.19□□□□□ -1.9
TRAF7Q6Q0C0 AC141846.1-201ENST00000568348 142 ntBASIC3.19□□□□□ -1.9
TRAF7Q6Q0C0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRAF7Q6Q0C0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
TRAF7Q6Q0C0 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.19□□□□□ -1.9
TRAF7Q6Q0C0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRAF7Q6Q0C0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
TRAF7Q6Q0C0 MIR148B-201ENST00000362252 99 ntBASIC3.18□□□□□ -1.9
TRAF7Q6Q0C0 AC087499.2-201ENST00000432861 149 ntBASIC3.18□□□□□ -1.9
TRAF7Q6Q0C0 MIR3920-201ENST00000581751 86 ntBASIC3.18□□□□□ -1.9
TRAF7Q6Q0C0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.18□□□□□ -1.9
TRAF7Q6Q0C0 AC023934.1-201ENST00000574529 2389 ntBASIC3.17□□□□□ -1.9
TRAF7Q6Q0C0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
TRAF7Q6Q0C0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRAF7Q6Q0C0 SNORA24B-201ENST00000384176 131 ntBASIC3.17□□□□□ -1.9
TRAF7Q6Q0C0 Y_RNA.537-201ENST00000384626 109 ntBASIC3.17□□□□□ -1.9
TRAF7Q6Q0C0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.17□□□□□ -1.9
TRAF7Q6Q0C0 MIR5094-201ENST00000578766 85 ntBASIC3.17□□□□□ -1.9
TRAF7Q6Q0C0 SNORA9.2-201ENST00000365361 133 ntBASIC3.16□□□□□ -1.9
TRAF7Q6Q0C0 MTND4LP1-201ENST00000446263 157 ntBASIC3.16□□□□□ -1.9
TRAF7Q6Q0C0 SNORD109B-201ENST00000458961 67 ntBASIC3.16□□□□□ -1.9
TRAF7Q6Q0C0 SNORD109A-201ENST00000459128 67 ntBASIC3.16□□□□□ -1.9
TRAF7Q6Q0C0 AC022513.1-201ENST00000624512 117 ntBASIC3.16□□□□□ -1.9
TRAF7Q6Q0C0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
TRAF7Q6Q0C0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.15□□□□□ -1.9
TRAF7Q6Q0C0 RNU6-654P-201ENST00000364373 107 ntBASIC3.15□□□□□ -1.91
TRAF7Q6Q0C0 RNU6-724P-201ENST00000390958 105 ntBASIC3.15□□□□□ -1.91
TRAF7Q6Q0C0 RNU11-3P-201ENST00000391111 133 ntBASIC3.15□□□□□ -1.91
TRAF7Q6Q0C0 U8.16-201ENST00000391279 133 ntBASIC3.15□□□□□ -1.91
TRAF7Q6Q0C0 BX510359.4-201ENST00000423750 193 ntBASIC3.15□□□□□ -1.91
TRAF7Q6Q0C0 AC027119.1-201ENST00000440877 241 ntBASIC3.15□□□□□ -1.91
TRAF7Q6Q0C0 MIR4506-201ENST00000584693 77 ntBASIC3.15□□□□□ -1.91
TRAF7Q6Q0C0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC3.15□□□□□ -1.91
TRAF7Q6Q0C0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRAF7Q6Q0C0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
TRAF7Q6Q0C0 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.14□□□□□ -1.91
TRAF7Q6Q0C0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 183.6 ms