Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RSPO4Q2I0M5 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.56□□□□□ -2
RSPO4Q2I0M5 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
RSPO4Q2I0M5 SNORA38-201ENST00000363946 132 ntBASIC2.56□□□□□ -2
RSPO4Q2I0M5 SNORA8.1-201ENST00000384250 140 ntBASIC2.56□□□□□ -2
RSPO4Q2I0M5 RNU6-614P-201ENST00000384369 107 ntBASIC2.56□□□□□ -2
RSPO4Q2I0M5 AC005908.1-201ENST00000468701 347 ntBASIC2.56□□□□□ -2
RSPO4Q2I0M5 RPL23AP42-201ENST00000471152 471 ntBASIC2.56□□□□□ -2
RSPO4Q2I0M5 MIR3169-201ENST00000578032 83 ntBASIC2.56□□□□□ -2
RSPO4Q2I0M5 AC090897.1-201ENST00000580909 226 ntBASIC2.56□□□□□ -2
RSPO4Q2I0M5 AC104996.3-201ENST00000590718 94 ntBASIC2.56□□□□□ -2
RSPO4Q2I0M5 U6.59-201ENST00000615686 107 ntBASIC2.56□□□□□ -2
RSPO4Q2I0M5 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
RSPO4Q2I0M5 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RSPO4Q2I0M5 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.55□□□□□ -2
RSPO4Q2I0M5 Y_RNA.12-201ENST00000362393 112 ntBASIC2.55□□□□□ -2
RSPO4Q2I0M5 RNY1P2-201ENST00000364820 117 ntBASIC2.55□□□□□ -2
RSPO4Q2I0M5 RNU6-132P-201ENST00000383863 107 ntBASIC2.55□□□□□ -2
RSPO4Q2I0M5 RNU6-1237P-201ENST00000384777 107 ntBASIC2.55□□□□□ -2
RSPO4Q2I0M5 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.55□□□□□ -2
RSPO4Q2I0M5 SNORA26.7-201ENST00000391288 122 ntBASIC2.55□□□□□ -2
RSPO4Q2I0M5 AP004217.1-201ENST00000480579 346 ntBASIC2.55□□□□□ -2
RSPO4Q2I0M5 RNU6-850P-201ENST00000516934 103 ntBASIC2.55□□□□□ -2
RSPO4Q2I0M5 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.55□□□□□ -2
RSPO4Q2I0M5 MIR4498-201ENST00000577599 66 ntBASIC2.55□□□□□ -2
RSPO4Q2I0M5 YWHAEP2-201ENST00000580066 112 ntBASIC2.55□□□□□ -2
RSPO4Q2I0M5 MIR3064-201ENST00000581130 66 ntBASIC2.55□□□□□ -2
RSPO4Q2I0M5 YWHAEP3-201ENST00000582767 121 ntBASIC2.55□□□□□ -2
RSPO4Q2I0M5 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.55□□□□□ -2
RSPO4Q2I0M5 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RSPO4Q2I0M5 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
RSPO4Q2I0M5 RNU6-630P-201ENST00000391258 106 ntBASIC2.54□□□□□ -2
RSPO4Q2I0M5 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.54□□□□□ -2
RSPO4Q2I0M5 HSPE1P24-201ENST00000450782 238 ntBASIC2.54□□□□□ -2
RSPO4Q2I0M5 AC022513.1-201ENST00000624512 117 ntBASIC2.54□□□□□ -2
RSPO4Q2I0M5 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.54□□□□□ -2
RSPO4Q2I0M5 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.54□□□□□ -2
RSPO4Q2I0M5 AL355596.1-201ENST00000565399 3996 ntBASIC2.53□□□□□ -2
RSPO4Q2I0M5 Y_RNA.36-201ENST00000362602 112 ntBASIC2.53□□□□□ -2
RSPO4Q2I0M5 SNORA25B-201ENST00000365507 128 ntBASIC2.53□□□□□ -2
RSPO4Q2I0M5 Y_RNA.491-201ENST00000384417 107 ntBASIC2.53□□□□□ -2
RSPO4Q2I0M5 AC023141.11-201ENST00000508864 202 ntBASIC2.53□□□□□ -2
RSPO4Q2I0M5 RNA5SP282-201ENST00000516355 108 ntBASIC2.53□□□□□ -2
RSPO4Q2I0M5 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.53□□□□□ -2
RSPO4Q2I0M5 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.53□□□□□ -2
RSPO4Q2I0M5 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.53□□□□□ -2
RSPO4Q2I0M5 AL021368.2-201ENST00000606125 5352 ntBASIC2.53□□□□□ -2.01
RSPO4Q2I0M5 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RSPO4Q2I0M5 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
RSPO4Q2I0M5 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RSPO4Q2I0M5 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RSPO4Q2I0M5 SNORA25.4-201ENST00000363666 124 ntBASIC2.52□□□□□ -2.01
RSPO4Q2I0M5 RNU1-91P-201ENST00000364746 163 ntBASIC2.52□□□□□ -2.01
RSPO4Q2I0M5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RSPO4Q2I0M5 MIR548U-201ENST00000390728 81 ntBASIC2.52□□□□□ -2.01
RSPO4Q2I0M5 RNU6-75P-201ENST00000515944 104 ntBASIC2.52□□□□□ -2.01
RSPO4Q2I0M5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.52□□□□□ -2.01
RSPO4Q2I0M5 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.52□□□□□ -2.01
RSPO4Q2I0M5 CYP3A52P-201ENST00000563326 91 ntBASIC2.52□□□□□ -2.01
RSPO4Q2I0M5 MIR4500-201ENST00000579472 76 ntBASIC2.52□□□□□ -2.01
RSPO4Q2I0M5 AL357312.1-201ENST00000603879 298 ntBASIC2.52□□□□□ -2.01
RSPO4Q2I0M5 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.52□□□□□ -2.01
RSPO4Q2I0M5 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RSPO4Q2I0M5 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
RSPO4Q2I0M5 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.51□□□□□ -2.01
RSPO4Q2I0M5 RNU6-330P-201ENST00000363015 107 ntBASIC2.51□□□□□ -2.01
RSPO4Q2I0M5 RNU6-23P-201ENST00000363283 107 ntBASIC2.51□□□□□ -2.01
RSPO4Q2I0M5 RNU6-1019P-201ENST00000364424 107 ntBASIC2.51□□□□□ -2.01
RSPO4Q2I0M5 RNU6-571P-201ENST00000384128 107 ntBASIC2.51□□□□□ -2.01
RSPO4Q2I0M5 MIR526A1-201ENST00000384897 85 ntBASIC2.51□□□□□ -2.01
RSPO4Q2I0M5 MIR942-201ENST00000401111 86 ntBASIC2.51□□□□□ -2.01
RSPO4Q2I0M5 RPS29P6-201ENST00000438196 145 ntBASIC2.51□□□□□ -2.01
RSPO4Q2I0M5 RPS27P21-201ENST00000486977 252 ntBASIC2.51□□□□□ -2.01
RSPO4Q2I0M5 AC141846.1-201ENST00000568348 142 ntBASIC2.51□□□□□ -2.01
RSPO4Q2I0M5 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.51□□□□□ -2.01
RSPO4Q2I0M5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.51□□□□□ -2.01
RSPO4Q2I0M5 AL161722.3-201ENST00000605789 2983 ntBASIC2.5□□□□□ -2.01
RSPO4Q2I0M5 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
RSPO4Q2I0M5 RNU6-950P-201ENST00000384651 107 ntBASIC2.5□□□□□ -2.01
RSPO4Q2I0M5 MIR489-201ENST00000384923 84 ntBASIC2.5□□□□□ -2.01
RSPO4Q2I0M5 AC069114.2-201ENST00000604699 304 ntBASIC2.5□□□□□ -2.01
RSPO4Q2I0M5 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.5□□□□□ -2.01
RSPO4Q2I0M5 SNORD36A-201ENST00000362874 73 ntBASIC2.49□□□□□ -2.01
RSPO4Q2I0M5 SNORA68.1-201ENST00000364537 132 ntBASIC2.49□□□□□ -2.01
RSPO4Q2I0M5 Y_RNA.283-201ENST00000364798 112 ntBASIC2.49□□□□□ -2.01
RSPO4Q2I0M5 SNORD21-201ENST00000383953 95 ntBASIC2.49□□□□□ -2.01
RSPO4Q2I0M5 Y_RNA.443-201ENST00000384135 111 ntBASIC2.49□□□□□ -2.01
RSPO4Q2I0M5 RNU6-154P-201ENST00000384306 106 ntBASIC2.49□□□□□ -2.01
RSPO4Q2I0M5 RNU6-1031P-201ENST00000384773 107 ntBASIC2.49□□□□□ -2.01
RSPO4Q2I0M5 SNORD90-201ENST00000391145 111 ntBASIC2.49□□□□□ -2.01
RSPO4Q2I0M5 AC092628.1-201ENST00000436250 252 ntBASIC2.49□□□□□ -2.01
RSPO4Q2I0M5 AC027119.1-201ENST00000440877 241 ntBASIC2.49□□□□□ -2.01
RSPO4Q2I0M5 AC079150.2-201ENST00000443733 78 ntBASIC2.49□□□□□ -2.01
RSPO4Q2I0M5 SNORD92-201ENST00000585078 85 ntBASIC2.49□□□□□ -2.01
RSPO4Q2I0M5 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
RSPO4Q2I0M5 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RSPO4Q2I0M5 MIR26A1-201ENST00000362205 77 ntBASIC2.48□□□□□ -2.01
RSPO4Q2I0M5 RNA5SP237-201ENST00000410414 113 ntBASIC2.48□□□□□ -2.01
RSPO4Q2I0M5 AC138749.4-201ENST00000563970 127 ntBASIC2.48□□□□□ -2.01
RSPO4Q2I0M5 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 194.5 ms