Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 RNU6-804P-201ENST00000384286 107 ntBASIC1.03□□□□□ -2.24
PRIM2P49643 RNA5SP144-201ENST00000410846 116 ntBASIC1.03□□□□□ -2.24
PRIM2P49643 SNORD83.1-201ENST00000411362 77 ntBASIC1.03□□□□□ -2.24
PRIM2P49643 RNU2-60P-201ENST00000517290 128 ntBASIC1.03□□□□□ -2.24
PRIM2P49643 MIR4771-2-201ENST00000577758 74 ntBASIC1.03□□□□□ -2.24
PRIM2P49643 Y_RNA.757-201ENST00000578934 114 ntBASIC1.03□□□□□ -2.24
PRIM2P49643 MIR4771-1-201ENST00000582617 74 ntBASIC1.03□□□□□ -2.24
PRIM2P49643 AL359821.1-201ENST00000605519 182 ntBASIC1.03□□□□□ -2.24
PRIM2P49643 Y_RNA.338-201ENST00000365320 114 ntBASIC1.02□□□□□ -2.25
PRIM2P49643 Y_RNA.400-201ENST00000383963 111 ntBASIC1.02□□□□□ -2.25
PRIM2P49643 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
PRIM2P49643 snoU13.21-201ENST00000459368 105 ntBASIC1.02□□□□□ -2.25
PRIM2P49643 AC108729.3-201ENST00000513484 108 ntBASIC1.02□□□□□ -2.25
PRIM2P49643 Y_RNA.690-201ENST00000516603 95 ntBASIC1.02□□□□□ -2.25
PRIM2P49643 AL662814.1-201ENST00000617364 121 ntBASIC1.02□□□□□ -2.25
PRIM2P49643 Y_RNA.8-201ENST00000362353 102 ntBASIC1.01□□□□□ -2.25
PRIM2P49643 RNU6-53P-201ENST00000365367 106 ntBASIC1.01□□□□□ -2.25
PRIM2P49643 RPL39P25-201ENST00000449384 154 ntBASIC1.01□□□□□ -2.25
PRIM2P49643 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.01□□□□□ -2.25
PRIM2P49643 AC113410.1-201ENST00000505029 247 ntBASIC1.01□□□□□ -2.25
PRIM2P49643 RNU6-977P-201ENST00000516411 103 ntBASIC1.01□□□□□ -2.25
PRIM2P49643 AC133485.4-201ENST00000561835 220 ntBASIC1.01□□□□□ -2.25
PRIM2P49643 AC138907.4-201ENST00000570107 226 ntBASIC1.01□□□□□ -2.25
PRIM2P49643 MIR548X2-201ENST00000579776 100 ntBASIC1.01□□□□□ -2.25
PRIM2P49643 MIR30D-201ENST00000362283 70 ntBASIC1□□□□□ -2.25
PRIM2P49643 Y_RNA.398-201ENST00000383952 99 ntBASIC1□□□□□ -2.25
PRIM2P49643 SNORD105-201ENST00000386910 85 ntBASIC1□□□□□ -2.25
PRIM2P49643 MIR1257-201ENST00000408490 117 ntBASIC1□□□□□ -2.25
PRIM2P49643 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1□□□□□ -2.25
PRIM2P49643 RNU7-197P-201ENST00000458836 62 ntBASIC1□□□□□ -2.25
PRIM2P49643 AC087343.1-201ENST00000477341 475 ntBASIC1□□□□□ -2.25
PRIM2P49643 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1□□□□□ -2.25
PRIM2P49643 MIR4305-201ENST00000583252 102 ntBASIC1□□□□□ -2.25
PRIM2P49643 SNORA4-201ENST00000584302 138 ntBASIC1□□□□□ -2.25
PRIM2P49643 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1□□□□□ -2.25
PRIM2P49643 AC091895.1-201ENST00000624494 256 ntBASIC1□□□□□ -2.25
PRIM2P49643 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
PRIM2P49643 MIR608-201ENST00000384820 100 ntBASIC0.99□□□□□ -2.25
PRIM2P49643 RNU7-113P-201ENST00000459273 62 ntBASIC0.99□□□□□ -2.25
PRIM2P49643 RNU6-1212P-201ENST00000517023 104 ntBASIC0.99□□□□□ -2.25
PRIM2P49643 MIR4676-201ENST00000583078 72 ntBASIC0.99□□□□□ -2.25
PRIM2P49643 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.99□□□□□ -2.25
PRIM2P49643 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
PRIM2P49643 RNU6-369P-201ENST00000362515 102 ntBASIC0.98□□□□□ -2.25
PRIM2P49643 SNORD115-2-201ENST00000362842 82 ntBASIC0.98□□□□□ -2.25
PRIM2P49643 RNU6-392P-201ENST00000364926 101 ntBASIC0.98□□□□□ -2.25
PRIM2P49643 SNORD115-20-201ENST00000365099 82 ntBASIC0.98□□□□□ -2.25
PRIM2P49643 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
PRIM2P49643 RNU6-321P-201ENST00000410912 106 ntBASIC0.98□□□□□ -2.25
PRIM2P49643 RNU7-185P-201ENST00000459215 60 ntBASIC0.98□□□□□ -2.25
PRIM2P49643 TRMT112P2-201ENST00000512910 132 ntBASIC0.98□□□□□ -2.25
PRIM2P49643 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.98□□□□□ -2.25
PRIM2P49643 AC021443.1-201ENST00000604478 211 ntBASIC0.98□□□□□ -2.25
PRIM2P49643 AL353765.1-201ENST00000605514 183 ntBASIC0.98□□□□□ -2.25
PRIM2P49643 uc_338.6-201ENST00000613544 171 ntBASIC0.98□□□□□ -2.25
PRIM2P49643 AC023934.1-201ENST00000574529 2389 ntBASIC0.98□□□□□ -2.25
PRIM2P49643 RNY1P11-201ENST00000363759 113 ntBASIC0.97□□□□□ -2.25
PRIM2P49643 SNORA18-201ENST00000384416 132 ntBASIC0.97□□□□□ -2.25
PRIM2P49643 RNU6-1237P-201ENST00000384777 107 ntBASIC0.97□□□□□ -2.25
PRIM2P49643 RNU6-907P-201ENST00000390924 102 ntBASIC0.97□□□□□ -2.25
PRIM2P49643 MIR938-201ENST00000401216 83 ntBASIC0.97□□□□□ -2.25
PRIM2P49643 RNU6-1086P-201ENST00000410930 100 ntBASIC0.97□□□□□ -2.25
PRIM2P49643 RNU6-1053P-201ENST00000515930 101 ntBASIC0.97□□□□□ -2.25
PRIM2P49643 RNU6-240P-201ENST00000516098 97 ntBASIC0.97□□□□□ -2.25
PRIM2P49643 Y_RNA.686-201ENST00000516548 134 ntBASIC0.97□□□□□ -2.25
PRIM2P49643 Y_RNA.692-201ENST00000516627 105 ntBASIC0.97□□□□□ -2.25
PRIM2P49643 AC141846.1-201ENST00000568348 142 ntBASIC0.97□□□□□ -2.25
PRIM2P49643 AC211469.2-201ENST00000605461 205 ntBASIC0.97□□□□□ -2.25
PRIM2P49643 SNORD114-21-201ENST00000606412 72 ntBASIC0.97□□□□□ -2.25
PRIM2P49643 RMST_2.1-201ENST00000617263 136 ntBASIC0.97□□□□□ -2.25
PRIM2P49643 AP001340.1-201ENST00000624405 217 ntBASIC0.97□□□□□ -2.25
PRIM2P49643 Y_RNA.215-201ENST00000364204 112 ntBASIC0.96□□□□□ -2.26
PRIM2P49643 RNU6-309P-201ENST00000364573 106 ntBASIC0.96□□□□□ -2.26
PRIM2P49643 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
PRIM2P49643 MIR520F-201ENST00000384824 87 ntBASIC0.96□□□□□ -2.26
PRIM2P49643 MIR125B2-201ENST00000385128 89 ntBASIC0.96□□□□□ -2.26
PRIM2P49643 Y_RNA.651-201ENST00000459380 103 ntBASIC0.96□□□□□ -2.26
PRIM2P49643 SNORA25.12-201ENST00000516202 82 ntBASIC0.96□□□□□ -2.26
PRIM2P49643 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.96□□□□□ -2.26
PRIM2P49643 MIR4804-201ENST00000581683 73 ntBASIC0.96□□□□□ -2.26
PRIM2P49643 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.96□□□□□ -2.26
PRIM2P49643 Y_RNA.171-201ENST00000363760 102 ntBASIC0.95□□□□□ -2.26
PRIM2P49643 RNU6-915P-201ENST00000364943 103 ntBASIC0.95□□□□□ -2.26
PRIM2P49643 RNU6-1335P-201ENST00000365426 107 ntBASIC0.95□□□□□ -2.26
PRIM2P49643 RNU6-460P-201ENST00000391158 108 ntBASIC0.95□□□□□ -2.26
PRIM2P49643 SNORD99-201ENST00000408612 74 ntBASIC0.95□□□□□ -2.26
PRIM2P49643 ACA64.5-201ENST00000516207 127 ntBASIC0.95□□□□□ -2.26
PRIM2P49643 AP001328.1-201ENST00000528550 176 ntBASIC0.95□□□□□ -2.26
PRIM2P49643 AC020891.4-201ENST00000605745 93 ntBASIC0.95□□□□□ -2.26
PRIM2P49643 AC021753.1-201ENST00000635724 168 ntBASIC0.95□□□□□ -2.26
PRIM2P49643 RNU6-949P-201ENST00000384040 107 ntBASIC0.94□□□□□ -2.26
PRIM2P49643 Y_RNA.488-201ENST00000384403 102 ntBASIC0.94□□□□□ -2.26
PRIM2P49643 Y_RNA.531-201ENST00000384589 121 ntBASIC0.94□□□□□ -2.26
PRIM2P49643 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.94□□□□□ -2.26
PRIM2P49643 RNU7-164P-201ENST00000459221 62 ntBASIC0.94□□□□□ -2.26
PRIM2P49643 RPL39P28-201ENST00000465655 155 ntBASIC0.94□□□□□ -2.26
PRIM2P49643 RNA5SP33-201ENST00000516687 98 ntBASIC0.94□□□□□ -2.26
PRIM2P49643 RNU6-1258P-201ENST00000516911 111 ntBASIC0.94□□□□□ -2.26
PRIM2P49643 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
PRIM2P49643 RNU4-38P-201ENST00000364472 129 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms