Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 MIR6841-201ENST00000637129 72 ntBASIC-2.83□□□□□ -2.86
HMGA1P17096 SNORD113-7-201ENST00000363762 77 ntBASIC-2.84□□□□□ -2.86
HMGA1P17096 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.84□□□□□ -2.86
HMGA1P17096 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-2.84□□□□□ -2.86
HMGA1P17096 AC024909.2-201ENST00000553035 286 ntBASIC-2.84□□□□□ -2.86
HMGA1P17096 Y_RNA.106-201ENST00000363189 100 ntBASIC-2.85□□□□□ -2.87
HMGA1P17096 RNU4-50P-201ENST00000364361 141 ntBASIC-2.85□□□□□ -2.87
HMGA1P17096 RNU6-660P-201ENST00000364566 109 ntBASIC-2.85□□□□□ -2.87
HMGA1P17096 Y_RNA.353-201ENST00000365440 108 ntBASIC-2.85□□□□□ -2.87
HMGA1P17096 Y_RNA.440-201ENST00000384120 114 ntBASIC-2.85□□□□□ -2.87
HMGA1P17096 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-2.85□□□□□ -2.87
HMGA1P17096 RPL35AP4-201ENST00000412007 102 ntBASIC-2.85□□□□□ -2.87
HMGA1P17096 RNU2-31P-201ENST00000516954 155 ntBASIC-2.85□□□□□ -2.87
HMGA1P17096 RNU6-337P-201ENST00000391243 106 ntBASIC-2.86□□□□□ -2.87
HMGA1P17096 Y_RNA.601-201ENST00000410500 113 ntBASIC-2.86□□□□□ -2.87
HMGA1P17096 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-2.86□□□□□ -2.87
HMGA1P17096 PMCHL1-202ENST00000423102 261 ntBASIC-2.86□□□□□ -2.87
HMGA1P17096 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-2.86□□□□□ -2.87
HMGA1P17096 RNU7-187P-201ENST00000458985 68 ntBASIC-2.86□□□□□ -2.87
HMGA1P17096 AC108081.1-201ENST00000604358 221 ntBASIC-2.86□□□□□ -2.87
HMGA1P17096 Y_RNA.27-201ENST00000362540 103 ntBASIC-2.87□□□□□ -2.87
HMGA1P17096 RNU4-80P-201ENST00000363200 141 ntBASIC-2.87□□□□□ -2.87
HMGA1P17096 Y_RNA.351-201ENST00000365436 96 ntBASIC-2.87□□□□□ -2.87
HMGA1P17096 SNORD116.1-201ENST00000365628 92 ntBASIC-2.87□□□□□ -2.87
HMGA1P17096 SNORD116-9-201ENST00000384000 95 ntBASIC-2.87□□□□□ -2.87
HMGA1P17096 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.87□□□□□ -2.87
HMGA1P17096 SNORD116-3-201ENST00000384287 95 ntBASIC-2.87□□□□□ -2.87
HMGA1P17096 SNORD116-8-201ENST00000384365 95 ntBASIC-2.87□□□□□ -2.87
HMGA1P17096 SNORD116-7-201ENST00000384404 95 ntBASIC-2.87□□□□□ -2.87
HMGA1P17096 SNORD116-5-201ENST00000384462 95 ntBASIC-2.87□□□□□ -2.87
HMGA1P17096 AL365203.2-201ENST00000423444 196 ntBASIC-2.87□□□□□ -2.87
HMGA1P17096 EIF1P2-201ENST00000428233 350 ntBASIC-2.87□□□□□ -2.87
HMGA1P17096 Vault.3-201ENST00000516676 95 ntBASIC-2.87□□□□□ -2.87
HMGA1P17096 RNU5F-6P-201ENST00000362979 116 ntBASIC-2.88□□□□□ -2.87
HMGA1P17096 Y_RNA.341-201ENST00000365341 102 ntBASIC-2.88□□□□□ -2.87
HMGA1P17096 AF228730.4-201ENST00000421457 183 ntBASIC-2.88□□□□□ -2.87
HMGA1P17096 CCDC34P1-201ENST00000507441 517 ntBASIC-2.88□□□□□ -2.87
HMGA1P17096 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-2.88□□□□□ -2.87
HMGA1P17096 SNORD67.1-201ENST00000516618 108 ntBASIC-2.88□□□□□ -2.87
HMGA1P17096 RNU7-137P-201ENST00000516788 62 ntBASIC-2.88□□□□□ -2.87
HMGA1P17096 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.88□□□□□ -2.87
HMGA1P17096 AC018638.8-201ENST00000588755 281 ntBASIC-2.88□□□□□ -2.87
HMGA1P17096 Y_RNA.101-201ENST00000363154 102 ntBASIC-2.89□□□□□ -2.87
HMGA1P17096 SNORA32-201ENST00000384072 121 ntBASIC-2.89□□□□□ -2.87
HMGA1P17096 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.89□□□□□ -2.87
HMGA1P17096 RNU6-80P-201ENST00000384195 107 ntBASIC-2.89□□□□□ -2.87
HMGA1P17096 SNORD116-12-201ENST00000384468 92 ntBASIC-2.89□□□□□ -2.87
HMGA1P17096 Y_RNA.505-201ENST00000384489 102 ntBASIC-2.89□□□□□ -2.87
HMGA1P17096 RNU6-21P-201ENST00000384710 107 ntBASIC-2.89□□□□□ -2.87
HMGA1P17096 AL590004.1-201ENST00000405321 300 ntBASIC-2.89□□□□□ -2.87
HMGA1P17096 MIR548H3-201ENST00000408771 118 ntBASIC-2.89□□□□□ -2.87
HMGA1P17096 MTATP6P19-201ENST00000413797 659 ntBASIC-2.89□□□□□ -2.87
HMGA1P17096 MTND3P1-201ENST00000441336 220 ntBASIC-2.89□□□□□ -2.87
HMGA1P17096 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.89□□□□□ -2.87
HMGA1P17096 FGF7P2-201ENST00000332473 296 ntBASIC-2.9□□□□□ -2.87
HMGA1P17096 Y_RNA.75-201ENST00000362927 97 ntBASIC-2.9□□□□□ -2.87
HMGA1P17096 RNU6-54P-201ENST00000365563 107 ntBASIC-2.9□□□□□ -2.87
HMGA1P17096 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.9□□□□□ -2.87
HMGA1P17096 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.9□□□□□ -2.87
HMGA1P17096 SNORA53-201ENST00000391141 249 ntBASIC-2.9□□□□□ -2.87
HMGA1P17096 Y_RNA.587-201ENST00000391210 103 ntBASIC-2.9□□□□□ -2.87
HMGA1P17096 BX295541.1-201ENST00000417774 250 ntBASIC-2.9□□□□□ -2.87
HMGA1P17096 AF228730.3-201ENST00000436691 102 ntBASIC-2.9□□□□□ -2.87
HMGA1P17096 RNU6-803P-201ENST00000516034 102 ntBASIC-2.9□□□□□ -2.87
HMGA1P17096 Y_RNA.706-201ENST00000516933 99 ntBASIC-2.9□□□□□ -2.87
HMGA1P17096 RNU7-35P-201ENST00000517174 62 ntBASIC-2.9□□□□□ -2.87
HMGA1P17096 AP002795.1-201ENST00000534879 84 ntBASIC-2.9□□□□□ -2.87
HMGA1P17096 AL080274.1-201ENST00000605565 220 ntBASIC-2.9□□□□□ -2.87
HMGA1P17096 RNU6-90P-201ENST00000606352 106 ntBASIC-2.9□□□□□ -2.87
HMGA1P17096 HULC.1-201ENST00000612720 240 ntBASIC-2.9□□□□□ -2.87
HMGA1P17096 Y_RNA.248-201ENST00000364501 109 ntBASIC-2.91□□□□□ -2.88
HMGA1P17096 Y_RNA.396-201ENST00000383949 103 ntBASIC-2.91□□□□□ -2.88
HMGA1P17096 RNU6-214P-201ENST00000384130 107 ntBASIC-2.91□□□□□ -2.88
HMGA1P17096 MIR548I2-201ENST00000408348 149 ntBASIC-2.91□□□□□ -2.88
HMGA1P17096 MTND3P21-201ENST00000433774 331 ntBASIC-2.91□□□□□ -2.88
HMGA1P17096 RNU7-106P-201ENST00000459514 67 ntBASIC-2.91□□□□□ -2.88
HMGA1P17096 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-2.91□□□□□ -2.88
HMGA1P17096 MIR5692C1-201ENST00000585309 91 ntBASIC-2.91□□□□□ -2.88
HMGA1P17096 AP001542.1-201ENST00000591314 200 ntBASIC-2.91□□□□□ -2.88
HMGA1P17096 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-2.91□□□□□ -2.88
HMGA1P17096 AC022140.2-201ENST00000623500 188 ntBASIC-2.91□□□□□ -2.88
HMGA1P17096 AC007494.3-201ENST00000624660 743 ntBASIC-2.91□□□□□ -2.88
HMGA1P17096 RNU6-522P-201ENST00000364497 107 ntBASIC-2.92□□□□□ -2.88
HMGA1P17096 Y_RNA.582-201ENST00000391023 95 ntBASIC-2.92□□□□□ -2.88
HMGA1P17096 RNU6-408P-201ENST00000515910 100 ntBASIC-2.92□□□□□ -2.88
HMGA1P17096 RNU6-436P-201ENST00000516171 114 ntBASIC-2.92□□□□□ -2.88
HMGA1P17096 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-2.92□□□□□ -2.88
HMGA1P17096 AC099654.13-201ENST00000639774 207 ntBASIC-2.92□□□□□ -2.88
HMGA1P17096 RNU6-1200P-201ENST00000384162 107 ntBASIC-2.93□□□□□ -2.88
HMGA1P17096 SNORD61-201ENST00000384252 73 ntBASIC-2.93□□□□□ -2.88
HMGA1P17096 RNU6-903P-201ENST00000391270 109 ntBASIC-2.93□□□□□ -2.88
HMGA1P17096 RNU6-155P-201ENST00000516347 100 ntBASIC-2.93□□□□□ -2.88
HMGA1P17096 RNU6-1006P-201ENST00000516998 103 ntBASIC-2.93□□□□□ -2.88
HMGA1P17096 AC144568.1-201ENST00000520139 137 ntBASIC-2.93□□□□□ -2.88
HMGA1P17096 AL158211.2-201ENST00000607282 395 ntBASIC-2.93□□□□□ -2.88
HMGA1P17096 AC091932.4-201ENST00000623386 200 ntBASIC-2.93□□□□□ -2.88
HMGA1P17096 RNU6-170P-201ENST00000362832 104 ntBASIC-2.94□□□□□ -2.88
HMGA1P17096 Y_RNA.153-201ENST00000363615 91 ntBASIC-2.94□□□□□ -2.88
HMGA1P17096 Y_RNA.310-201ENST00000365063 113 ntBASIC-2.94□□□□□ -2.88
HMGA1P17096 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.94□□□□□ -2.88
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms