Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
NID1P14543 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
NID1P14543 RNU6-296P-201ENST00000384608 107 ntBASIC2.46□□□□□ -2.02
NID1P14543 AC011753.1-201ENST00000451001 220 ntBASIC2.46□□□□□ -2.02
NID1P14543 SNORD109B-201ENST00000458961 67 ntBASIC2.46□□□□□ -2.02
NID1P14543 SNORD109A-201ENST00000459128 67 ntBASIC2.46□□□□□ -2.02
NID1P14543 AC008413.1-201ENST00000511864 177 ntBASIC2.46□□□□□ -2.02
NID1P14543 RNU6-557P-201ENST00000516842 110 ntBASIC2.46□□□□□ -2.02
NID1P14543 MIR4635-201ENST00000583759 79 ntBASIC2.46□□□□□ -2.02
NID1P14543 Y_RNA.788-201ENST00000622394 112 ntBASIC2.46□□□□□ -2.02
NID1P14543 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NID1P14543 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NID1P14543 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
NID1P14543 RNU6-523P-201ENST00000516304 54 ntBASIC2.45□□□□□ -2.02
NID1P14543 AC090897.1-201ENST00000580909 226 ntBASIC2.45□□□□□ -2.02
NID1P14543 MIR4251-201ENST00000635819 61 ntBASIC2.45□□□□□ -2.02
NID1P14543 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
NID1P14543 Y_RNA.508-201ENST00000384502 114 ntBASIC2.44□□□□□ -2.02
NID1P14543 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
NID1P14543 RNU7-26P-201ENST00000458980 63 ntBASIC2.44□□□□□ -2.02
NID1P14543 MIR4446-201ENST00000578505 67 ntBASIC2.44□□□□□ -2.02
NID1P14543 MIR3935-201ENST00000583472 104 ntBASIC2.44□□□□□ -2.02
NID1P14543 AL662814.1-201ENST00000617364 121 ntBASIC2.44□□□□□ -2.02
NID1P14543 SNORA38-201ENST00000363946 132 ntBASIC2.43□□□□□ -2.02
NID1P14543 RNU6-686P-201ENST00000364839 107 ntBASIC2.43□□□□□ -2.02
NID1P14543 MIR518A2-201ENST00000384966 87 ntBASIC2.43□□□□□ -2.02
NID1P14543 AC019129.1-201ENST00000403786 261 ntBASIC2.43□□□□□ -2.02
NID1P14543 RNU4-83P-201ENST00000410863 133 ntBASIC2.43□□□□□ -2.02
NID1P14543 SNRPGP12-201ENST00000449481 213 ntBASIC2.43□□□□□ -2.02
NID1P14543 RNU7-85P-201ENST00000458851 63 ntBASIC2.43□□□□□ -2.02
NID1P14543 RPS27P21-201ENST00000486977 252 ntBASIC2.43□□□□□ -2.02
NID1P14543 RNU6-917P-201ENST00000516294 104 ntBASIC2.43□□□□□ -2.02
NID1P14543 MIR4796-201ENST00000580742 81 ntBASIC2.43□□□□□ -2.02
NID1P14543 MIRLET7A1-201ENST00000362295 80 ntBASIC2.42□□□□□ -2.02
NID1P14543 RNU6-949P-201ENST00000384040 107 ntBASIC2.42□□□□□ -2.02
NID1P14543 SNORA40.18-201ENST00000391200 128 ntBASIC2.42□□□□□ -2.02
NID1P14543 RNA5SP501-201ENST00000410990 112 ntBASIC2.42□□□□□ -2.02
NID1P14543 Y_RNA.648-201ENST00000459455 110 ntBASIC2.42□□□□□ -2.02
NID1P14543 RNU6-539P-201ENST00000516665 103 ntBASIC2.42□□□□□ -2.02
NID1P14543 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.42□□□□□ -2.02
NID1P14543 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.42□□□□□ -2.02
NID1P14543 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
NID1P14543 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
NID1P14543 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
NID1P14543 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
NID1P14543 SNORA63.2-201ENST00000362603 126 ntBASIC2.41□□□□□ -2.02
NID1P14543 RNU6-411P-201ENST00000384451 107 ntBASIC2.41□□□□□ -2.02
NID1P14543 RNU6-871P-201ENST00000516122 100 ntBASIC2.41□□□□□ -2.02
NID1P14543 RNA5SP282-201ENST00000516355 108 ntBASIC2.41□□□□□ -2.02
NID1P14543 RNU6-850P-201ENST00000516934 103 ntBASIC2.41□□□□□ -2.02
NID1P14543 MIR3134-201ENST00000579433 74 ntBASIC2.41□□□□□ -2.02
NID1P14543 MIR4500-201ENST00000579472 76 ntBASIC2.41□□□□□ -2.02
NID1P14543 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.41□□□□□ -2.02
NID1P14543 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
NID1P14543 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
NID1P14543 SNORA25.9-201ENST00000365087 128 ntBASIC2.4□□□□□ -2.03
NID1P14543 RNU1-138P-201ENST00000384093 164 ntBASIC2.4□□□□□ -2.03
NID1P14543 RNA5SP210-201ENST00000391034 120 ntBASIC2.4□□□□□ -2.03
NID1P14543 SCARNA18B-201ENST00000458806 135 ntBASIC2.4□□□□□ -2.03
NID1P14543 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.4□□□□□ -2.03
NID1P14543 Y_RNA.660-201ENST00000516002 120 ntBASIC2.4□□□□□ -2.03
NID1P14543 MIR5092-201ENST00000583139 88 ntBASIC2.4□□□□□ -2.03
NID1P14543 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.39□□□□□ -2.03
NID1P14543 RNU6-571P-201ENST00000384128 107 ntBASIC2.39□□□□□ -2.03
NID1P14543 SNORA72.6-201ENST00000384520 129 ntBASIC2.39□□□□□ -2.03
NID1P14543 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
NID1P14543 FGF7P7-201ENST00000514120 227 ntBASIC2.39□□□□□ -2.03
NID1P14543 AC138749.4-201ENST00000563970 127 ntBASIC2.39□□□□□ -2.03
NID1P14543 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.39□□□□□ -2.03
NID1P14543 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.39□□□□□ -2.03
NID1P14543 FO624990.1-201ENST00000636373 85 ntBASIC2.39□□□□□ -2.03
NID1P14543 WWP1P1-201ENST00000466609 2769 ntBASIC2.38□□□□□ -2.03
NID1P14543 RNU6-1123P-201ENST00000362347 106 ntBASIC2.38□□□□□ -2.03
NID1P14543 RNU6-859P-201ENST00000362728 107 ntBASIC2.38□□□□□ -2.03
NID1P14543 RNU6-161P-201ENST00000363051 106 ntBASIC2.38□□□□□ -2.03
NID1P14543 RNU6-811P-201ENST00000384069 107 ntBASIC2.38□□□□□ -2.03
NID1P14543 HMGN2P39-201ENST00000398005 273 ntBASIC2.38□□□□□ -2.03
NID1P14543 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.38□□□□□ -2.03
NID1P14543 SUMO1P4-201ENST00000429430 302 ntBASIC2.37□□□□□ -2.03
NID1P14543 RNU7-41P-201ENST00000515917 61 ntBASIC2.37□□□□□ -2.03
NID1P14543 RNU6-322P-201ENST00000516010 103 ntBASIC2.37□□□□□ -2.03
NID1P14543 RNU6-1108P-201ENST00000516308 104 ntBASIC2.37□□□□□ -2.03
NID1P14543 U6.109-201ENST00000636749 87 ntBASIC2.37□□□□□ -2.03
NID1P14543 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
NID1P14543 RNU1-51P-201ENST00000365345 176 ntBASIC2.36□□□□□ -2.03
NID1P14543 SNORA70B-201ENST00000384210 135 ntBASIC2.36□□□□□ -2.03
NID1P14543 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.36□□□□□ -2.03
NID1P14543 AC009474.2-201ENST00000451383 136 ntBASIC2.36□□□□□ -2.03
NID1P14543 snoU13.2-201ENST00000459201 104 ntBASIC2.36□□□□□ -2.03
NID1P14543 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.36□□□□□ -2.03
NID1P14543 MIR4536-1-201ENST00000583537 88 ntBASIC2.36□□□□□ -2.03
NID1P14543 U1.36-201ENST00000620684 176 ntBASIC2.36□□□□□ -2.03
NID1P14543 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
NID1P14543 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
NID1P14543 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
NID1P14543 AC131280.1-202ENST00000624067 4211 ntBASIC2.35□□□□□ -2.03
NID1P14543 BX276092.1-201ENST00000427368 251 ntBASIC2.35□□□□□ -2.03
NID1P14543 AL513328.1-201ENST00000446460 224 ntBASIC2.35□□□□□ -2.03
NID1P14543 AC125388.1-201ENST00000459631 156 ntBASIC2.35□□□□□ -2.03
NID1P14543 AC023790.1-201ENST00000482174 347 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms