Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RNU7-80P-201ENST00000459562 61 ntBASIC0.06□□□□□ -2.4
HLA-DPB1P04440 TRBVB-201ENST00000477100 408 ntBASIC0.06□□□□□ -2.4
HLA-DPB1P04440 RNU6-469P-201ENST00000516253 101 ntBASIC0.06□□□□□ -2.4
HLA-DPB1P04440 AC112693.2-201ENST00000556538 232 ntBASIC0.06□□□□□ -2.4
HLA-DPB1P04440 MIR6718-201ENST00000616153 80 ntBASIC0.06□□□□□ -2.4
HLA-DPB1P04440 MIR6755-201ENST00000619993 66 ntBASIC0.06□□□□□ -2.4
HLA-DPB1P04440 Y_RNA.176-201ENST00000363815 109 ntBASIC0.05□□□□□ -2.4
HLA-DPB1P04440 RNU4-67P-201ENST00000364569 141 ntBASIC0.05□□□□□ -2.4
HLA-DPB1P04440 Y_RNA.416-201ENST00000384014 113 ntBASIC0.05□□□□□ -2.4
HLA-DPB1P04440 MIR613-201ENST00000385248 95 ntBASIC0.05□□□□□ -2.4
HLA-DPB1P04440 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
HLA-DPB1P04440 Y_RNA.618-201ENST00000410949 107 ntBASIC0.05□□□□□ -2.4
HLA-DPB1P04440 MTND5P34-201ENST00000568888 325 ntBASIC0.05□□□□□ -2.4
HLA-DPB1P04440 MIR4282-201ENST00000583613 67 ntBASIC0.05□□□□□ -2.4
HLA-DPB1P04440 AL365205.2-201ENST00000594586 68 ntBASIC0.05□□□□□ -2.4
HLA-DPB1P04440 MIR7111-201ENST00000619751 72 ntBASIC0.05□□□□□ -2.4
HLA-DPB1P04440 MIR4315-1-201ENST00000636800 73 ntBASIC0.05□□□□□ -2.4
HLA-DPB1P04440 MIR4315-2-201ENST00000640925 73 ntBASIC0.05□□□□□ -2.4
HLA-DPB1P04440 SNORA22.1-201ENST00000362701 134 ntBASIC0.04□□□□□ -2.4
HLA-DPB1P04440 RNU6-867P-201ENST00000364956 107 ntBASIC0.04□□□□□ -2.4
HLA-DPB1P04440 RNU6-1292P-201ENST00000383856 107 ntBASIC0.04□□□□□ -2.4
HLA-DPB1P04440 RNU6-187P-201ENST00000384139 106 ntBASIC0.04□□□□□ -2.4
HLA-DPB1P04440 SNORA72.6-201ENST00000384520 129 ntBASIC0.04□□□□□ -2.4
HLA-DPB1P04440 RNU6-291P-201ENST00000384720 107 ntBASIC0.04□□□□□ -2.4
HLA-DPB1P04440 Y_RNA.590-201ENST00000410140 107 ntBASIC0.04□□□□□ -2.4
HLA-DPB1P04440 SNORA25.16-201ENST00000516741 121 ntBASIC0.04□□□□□ -2.4
HLA-DPB1P04440 RNU6-765P-201ENST00000516916 99 ntBASIC0.04□□□□□ -2.4
HLA-DPB1P04440 AL356055.1-201ENST00000602528 446 ntBASIC0.04□□□□□ -2.4
HLA-DPB1P04440 AC021613.1-201ENST00000623880 111 ntBASIC0.04□□□□□ -2.4
HLA-DPB1P04440 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
HLA-DPB1P04440 Y_RNA.202-201ENST00000364083 110 ntBASIC0.03□□□□□ -2.4
HLA-DPB1P04440 SNORA33.2-201ENST00000365413 134 ntBASIC0.03□□□□□ -2.4
HLA-DPB1P04440 RNU6-949P-201ENST00000384040 107 ntBASIC0.03□□□□□ -2.4
HLA-DPB1P04440 Y_RNA.454-201ENST00000384224 113 ntBASIC0.03□□□□□ -2.4
HLA-DPB1P04440 SNORA18-201ENST00000384416 132 ntBASIC0.03□□□□□ -2.4
HLA-DPB1P04440 Y_RNA.539-201ENST00000384635 107 ntBASIC0.03□□□□□ -2.4
HLA-DPB1P04440 RNU6-1109P-201ENST00000391187 107 ntBASIC0.03□□□□□ -2.4
HLA-DPB1P04440 RNU6-1258P-201ENST00000516911 111 ntBASIC0.03□□□□□ -2.4
HLA-DPB1P04440 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.03□□□□□ -2.4
HLA-DPB1P04440 MIR3152-201ENST00000579801 74 ntBASIC0.03□□□□□ -2.4
HLA-DPB1P04440 AC023932.2-201ENST00000603176 175 ntBASIC0.03□□□□□ -2.4
HLA-DPB1P04440 MIR6828-201ENST00000636181 60 ntBASIC0.03□□□□□ -2.4
HLA-DPB1P04440 Y_RNA.36-201ENST00000362602 112 ntBASIC0.02□□□□□ -2.41
HLA-DPB1P04440 RNU4-16P-201ENST00000364737 141 ntBASIC0.02□□□□□ -2.41
HLA-DPB1P04440 RNY1P13-201ENST00000365030 105 ntBASIC0.02□□□□□ -2.41
HLA-DPB1P04440 RNU6-728P-201ENST00000365375 104 ntBASIC0.02□□□□□ -2.41
HLA-DPB1P04440 Y_RNA.483-201ENST00000384380 101 ntBASIC0.02□□□□□ -2.41
HLA-DPB1P04440 Y_RNA.536-201ENST00000384621 113 ntBASIC0.02□□□□□ -2.41
HLA-DPB1P04440 SNORA20-201ENST00000384662 132 ntBASIC0.02□□□□□ -2.41
HLA-DPB1P04440 MT-TW-201ENST00000387382 68 ntBASIC0.02□□□□□ -2.41
HLA-DPB1P04440 PCNPP3-201ENST00000393579 471 ntBASIC0.02□□□□□ -2.41
HLA-DPB1P04440 AL358176.2-201ENST00000425769 204 ntBASIC0.02□□□□□ -2.41
HLA-DPB1P04440 MTCYBP6-201ENST00000441810 138 ntBASIC0.02□□□□□ -2.41
HLA-DPB1P04440 Y_RNA.679-201ENST00000516416 91 ntBASIC0.02□□□□□ -2.41
HLA-DPB1P04440 SNORA62.5-201ENST00000516634 120 ntBASIC0.02□□□□□ -2.41
HLA-DPB1P04440 SCARNA15-202ENST00000516881 127 ntBASIC0.02□□□□□ -2.41
HLA-DPB1P04440 SCARNA16.5-201ENST00000517114 183 ntBASIC0.02□□□□□ -2.41
HLA-DPB1P04440 RNA5SP47-201ENST00000517230 109 ntBASIC0.02□□□□□ -2.41
HLA-DPB1P04440 MIR4643-201ENST00000577473 78 ntBASIC0.02□□□□□ -2.41
HLA-DPB1P04440 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.02□□□□□ -2.41
HLA-DPB1P04440 RNA5SP214-201ENST00000363378 118 ntBASIC0.01□□□□□ -2.41
HLA-DPB1P04440 SNORA42.1-201ENST00000363515 137 ntBASIC0.01□□□□□ -2.41
HLA-DPB1P04440 SNORD114-9-201ENST00000364370 72 ntBASIC0.01□□□□□ -2.41
HLA-DPB1P04440 RNU6-978P-201ENST00000364371 103 ntBASIC0.01□□□□□ -2.41
HLA-DPB1P04440 RNU4-17P-201ENST00000365598 141 ntBASIC0.01□□□□□ -2.41
HLA-DPB1P04440 Y_RNA.423-201ENST00000384057 113 ntBASIC0.01□□□□□ -2.41
HLA-DPB1P04440 RNU6-535P-201ENST00000384722 107 ntBASIC0.01□□□□□ -2.41
HLA-DPB1P04440 RNU4-43P-201ENST00000410628 137 ntBASIC0.01□□□□□ -2.41
HLA-DPB1P04440 RNA5SP227-201ENST00000516184 113 ntBASIC0.01□□□□□ -2.41
HLA-DPB1P04440 MIR1273G-201ENST00000577677 100 ntBASIC0.01□□□□□ -2.41
HLA-DPB1P04440 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.01□□□□□ -2.41
HLA-DPB1P04440 MTND5P32-201ENST00000560711 1802 ntBASIC0.01□□□□□ -2.41
HLA-DPB1P04440 MIR335-201ENST00000362173 94 ntBASIC0□□□□□ -2.41
HLA-DPB1P04440 Y_RNA.174-201ENST00000363781 105 ntBASIC0□□□□□ -2.41
HLA-DPB1P04440 SNORD28-201ENST00000384706 75 ntBASIC0□□□□□ -2.41
HLA-DPB1P04440 SNORA79-201ENST00000408376 140 ntBASIC0□□□□□ -2.41
HLA-DPB1P04440 MTATP8P1-201ENST00000467115 207 ntBASIC0□□□□□ -2.41
HLA-DPB1P04440 Y_RNA.697-201ENST00000516776 113 ntBASIC0□□□□□ -2.41
HLA-DPB1P04440 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
HLA-DPB1P04440 AP001094.1-201ENST00000579805 193 ntBASIC0□□□□□ -2.41
HLA-DPB1P04440 AC104408.1-201ENST00000605241 170 ntBASIC0□□□□□ -2.41
HLA-DPB1P04440 AC011921.3-201ENST00000605540 361 ntBASIC0□□□□□ -2.41
HLA-DPB1P04440 RNA5SP245-201ENST00000364239 121 ntBASIC-0.01□□□□□ -2.41
HLA-DPB1P04440 RNU6-639P-201ENST00000384074 107 ntBASIC-0.01□□□□□ -2.41
HLA-DPB1P04440 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.01□□□□□ -2.41
HLA-DPB1P04440 RNU6-713P-201ENST00000384761 107 ntBASIC-0.01□□□□□ -2.41
HLA-DPB1P04440 RNU6-635P-201ENST00000516651 102 ntBASIC-0.01□□□□□ -2.41
HLA-DPB1P04440 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.01□□□□□ -2.41
HLA-DPB1P04440 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.01□□□□□ -2.41
HLA-DPB1P04440 AC244669.1-204ENST00000621564 178 ntBASIC-0.01□□□□□ -2.41
HLA-DPB1P04440 SNORA9.1-201ENST00000362412 131 ntBASIC-0.02□□□□□ -2.41
HLA-DPB1P04440 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.02□□□□□ -2.41
HLA-DPB1P04440 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
HLA-DPB1P04440 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.02□□□□□ -2.41
HLA-DPB1P04440 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.02□□□□□ -2.41
HLA-DPB1P04440 AL121914.1-201ENST00000450188 156 ntBASIC-0.02□□□□□ -2.41
HLA-DPB1P04440 RNY3P16-201ENST00000516338 101 ntBASIC-0.02□□□□□ -2.41
HLA-DPB1P04440 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.02□□□□□ -2.41
HLA-DPB1P04440 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.02□□□□□ -2.41
HLA-DPB1P04440 RNU7-70P-201ENST00000516941 66 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 202.2 ms