Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC131281.1-201ENST00000522984 164 ntBASIC0.04□□□□□ -2.4
COL4A1P02462 MIR4645-201ENST00000583158 77 ntBASIC0.04□□□□□ -2.4
COL4A1P02462 AC006006.1-201ENST00000603082 144 ntBASIC0.04□□□□□ -2.4
COL4A1P02462 MIR6717-201ENST00000622747 73 ntBASIC0.04□□□□□ -2.4
COL4A1P02462 AC134503.1-201ENST00000633048 54 ntBASIC0.04□□□□□ -2.4
COL4A1P02462 Y_RNA.19-201ENST00000362462 99 ntBASIC0.03□□□□□ -2.4
COL4A1P02462 Y_RNA.84-201ENST00000363011 104 ntBASIC0.03□□□□□ -2.4
COL4A1P02462 RNU6-403P-201ENST00000363163 104 ntBASIC0.03□□□□□ -2.4
COL4A1P02462 Y_RNA.214-201ENST00000364201 112 ntBASIC0.03□□□□□ -2.4
COL4A1P02462 Y_RNA.217-201ENST00000364214 105 ntBASIC0.03□□□□□ -2.4
COL4A1P02462 Y_RNA.304-201ENST00000365011 112 ntBASIC0.03□□□□□ -2.4
COL4A1P02462 RNU6-302P-201ENST00000365249 107 ntBASIC0.03□□□□□ -2.4
COL4A1P02462 RNU6-728P-201ENST00000365375 104 ntBASIC0.03□□□□□ -2.4
COL4A1P02462 RNU6-949P-201ENST00000384040 107 ntBASIC0.03□□□□□ -2.4
COL4A1P02462 Y_RNA.431-201ENST00000384086 102 ntBASIC0.03□□□□□ -2.4
COL4A1P02462 SNORA8.2-201ENST00000384372 139 ntBASIC0.03□□□□□ -2.4
COL4A1P02462 Y_RNA.536-201ENST00000384621 113 ntBASIC0.03□□□□□ -2.4
COL4A1P02462 MIR214-201ENST00000385214 110 ntBASIC0.03□□□□□ -2.4
COL4A1P02462 MIR601-201ENST00000385256 79 ntBASIC0.03□□□□□ -2.4
COL4A1P02462 RNU6-1228P-201ENST00000391014 107 ntBASIC0.03□□□□□ -2.4
COL4A1P02462 AC073261.1-201ENST00000429409 121 ntBASIC0.03□□□□□ -2.4
COL4A1P02462 Y_RNA.641-201ENST00000459414 105 ntBASIC0.03□□□□□ -2.4
COL4A1P02462 RNU6-1137P-201ENST00000517073 99 ntBASIC0.03□□□□□ -2.4
COL4A1P02462 MIR4801-201ENST00000582704 82 ntBASIC0.03□□□□□ -2.4
COL4A1P02462 SNORA25.18-201ENST00000607153 114 ntBASIC0.03□□□□□ -2.4
COL4A1P02462 Y_RNA.16-201ENST00000362421 102 ntBASIC0.02□□□□□ -2.41
COL4A1P02462 Y_RNA.44-201ENST00000362676 108 ntBASIC0.02□□□□□ -2.41
COL4A1P02462 RNU6-1099P-201ENST00000363533 107 ntBASIC0.02□□□□□ -2.41
COL4A1P02462 RNU6-535P-201ENST00000384722 107 ntBASIC0.02□□□□□ -2.41
COL4A1P02462 MIR526A2-201ENST00000390198 65 ntBASIC0.02□□□□□ -2.41
COL4A1P02462 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
COL4A1P02462 AL606845.1-201ENST00000404881 255 ntBASIC0.02□□□□□ -2.41
COL4A1P02462 RNA5SP261-201ENST00000410536 106 ntBASIC0.02□□□□□ -2.41
COL4A1P02462 RNA5SP153-201ENST00000516498 76 ntBASIC0.02□□□□□ -2.41
COL4A1P02462 RNU7-53P-201ENST00000516705 60 ntBASIC0.02□□□□□ -2.41
COL4A1P02462 AC112693.2-201ENST00000556538 232 ntBASIC0.02□□□□□ -2.41
COL4A1P02462 Y_RNA.42-201ENST00000362660 108 ntBASIC0.02□□□□□ -2.41
COL4A1P02462 Y_RNA.430-201ENST00000384081 110 ntBASIC0.02□□□□□ -2.41
COL4A1P02462 MT-TD-201ENST00000387419 68 ntBASIC0.02□□□□□ -2.41
COL4A1P02462 RNU6-1009P-201ENST00000390996 107 ntBASIC0.02□□□□□ -2.41
COL4A1P02462 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.02□□□□□ -2.41
COL4A1P02462 SEPT7P4-201ENST00000437076 306 ntBASIC0.02□□□□□ -2.41
COL4A1P02462 RNU6-561P-201ENST00000516222 102 ntBASIC0.02□□□□□ -2.41
COL4A1P02462 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.02□□□□□ -2.41
COL4A1P02462 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.02□□□□□ -2.41
COL4A1P02462 MIR548S-201ENST00000581352 82 ntBASIC0.02□□□□□ -2.41
COL4A1P02462 MTND4P29-201ENST00000503122 1372 ntBASIC0.01□□□□□ -2.41
COL4A1P02462 Y_RNA.23-201ENST00000362496 106 ntBASIC0.01□□□□□ -2.41
COL4A1P02462 Y_RNA.91-201ENST00000363042 107 ntBASIC0.01□□□□□ -2.41
COL4A1P02462 Y_RNA.158-201ENST00000363651 101 ntBASIC0.01□□□□□ -2.41
COL4A1P02462 RNU6-597P-201ENST00000365620 102 ntBASIC0.01□□□□□ -2.41
COL4A1P02462 RNU6-1126P-201ENST00000384002 107 ntBASIC0.01□□□□□ -2.41
COL4A1P02462 Y_RNA.416-201ENST00000384014 113 ntBASIC0.01□□□□□ -2.41
COL4A1P02462 SNORA79-201ENST00000408376 140 ntBASIC0.01□□□□□ -2.41
COL4A1P02462 MIR548I3-201ENST00000408378 149 ntBASIC0.01□□□□□ -2.41
COL4A1P02462 MIR1257-201ENST00000408490 117 ntBASIC0.01□□□□□ -2.41
COL4A1P02462 RNA5SP237-201ENST00000410414 113 ntBASIC0.01□□□□□ -2.41
COL4A1P02462 Y_RNA.622-201ENST00000411091 108 ntBASIC0.01□□□□□ -2.41
COL4A1P02462 SNORD71-201ENST00000411292 86 ntBASIC0.01□□□□□ -2.41
COL4A1P02462 RNU7-45P-201ENST00000459460 63 ntBASIC0.01□□□□□ -2.41
COL4A1P02462 RNU7-79P-201ENST00000516082 62 ntBASIC0.01□□□□□ -2.41
COL4A1P02462 RNU6-469P-201ENST00000516253 101 ntBASIC0.01□□□□□ -2.41
COL4A1P02462 RNU6-988P-201ENST00000519081 107 ntBASIC0.01□□□□□ -2.41
COL4A1P02462 AC104408.1-201ENST00000605241 170 ntBASIC0.01□□□□□ -2.41
COL4A1P02462 AC037487.3-201ENST00000606668 112 ntBASIC0.01□□□□□ -2.41
COL4A1P02462 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.01□□□□□ -2.41
COL4A1P02462 MIR6082-201ENST00000613604 109 ntBASIC0.01□□□□□ -2.41
COL4A1P02462 AL662814.1-201ENST00000617364 121 ntBASIC0.01□□□□□ -2.41
COL4A1P02462 Y_RNA.174-201ENST00000363781 105 ntBASIC0□□□□□ -2.41
COL4A1P02462 Y_RNA.210-201ENST00000364161 110 ntBASIC0□□□□□ -2.41
COL4A1P02462 RNU6-450P-201ENST00000364654 107 ntBASIC0□□□□□ -2.41
COL4A1P02462 Y_RNA.432-201ENST00000384087 111 ntBASIC0□□□□□ -2.41
COL4A1P02462 Y_RNA.455-201ENST00000384230 98 ntBASIC0□□□□□ -2.41
COL4A1P02462 RNU4-83P-201ENST00000410863 133 ntBASIC0□□□□□ -2.41
COL4A1P02462 AC096949.1-201ENST00000412047 152 ntBASIC0□□□□□ -2.41
COL4A1P02462 SNX3P1X-201ENST00000414887 175 ntBASIC0□□□□□ -2.41
COL4A1P02462 RNU7-96P-201ENST00000459535 64 ntBASIC0□□□□□ -2.41
COL4A1P02462 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0□□□□□ -2.41
COL4A1P02462 RNA5SP227-201ENST00000516184 113 ntBASIC0□□□□□ -2.41
COL4A1P02462 SNORA40.15-201ENST00000516884 107 ntBASIC0□□□□□ -2.41
COL4A1P02462 SCARNA16.5-201ENST00000517114 183 ntBASIC0□□□□□ -2.41
COL4A1P02462 AC133485.4-201ENST00000561835 220 ntBASIC0□□□□□ -2.41
COL4A1P02462 MIR3129-201ENST00000581095 76 ntBASIC0□□□□□ -2.41
COL4A1P02462 MIR3171-201ENST00000584270 74 ntBASIC0□□□□□ -2.41
COL4A1P02462 NEAT1_2.1-201ENST00000620525 105 ntBASIC0□□□□□ -2.41
COL4A1P02462 AC244669.1-204ENST00000621564 178 ntBASIC0□□□□□ -2.41
COL4A1P02462 AC091932.4-201ENST00000623386 200 ntBASIC0□□□□□ -2.41
COL4A1P02462 AL596211.1-201ENST00000569873 2277 ntBASIC-0□□□□□ -2.41
COL4A1P02462 MIR335-201ENST00000362173 94 ntBASIC-0.01□□□□□ -2.41
COL4A1P02462 RNU6-290P-201ENST00000365212 101 ntBASIC-0.01□□□□□ -2.41
COL4A1P02462 SNORD28-201ENST00000384706 75 ntBASIC-0.01□□□□□ -2.41
COL4A1P02462 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.01□□□□□ -2.41
COL4A1P02462 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.01□□□□□ -2.41
COL4A1P02462 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.01□□□□□ -2.41
COL4A1P02462 MTND5P22-201ENST00000458380 195 ntBASIC-0.01□□□□□ -2.41
COL4A1P02462 RNU6-893P-201ENST00000458841 100 ntBASIC-0.01□□□□□ -2.41
COL4A1P02462 RNU6-570P-201ENST00000517051 105 ntBASIC-0.01□□□□□ -2.41
COL4A1P02462 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.02□□□□□ -2.41
COL4A1P02462 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.02□□□□□ -2.41
COL4A1P02462 RNU6-867P-201ENST00000364956 107 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms