Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 Y_RNA.32-201ENST00000362589 110 ntBASIC0.08□□□□□ -2.4
HLA-DQA1P01909 Y_RNA.176-201ENST00000363815 109 ntBASIC0.08□□□□□ -2.4
HLA-DQA1P01909 RNU6-1292P-201ENST00000383856 107 ntBASIC0.08□□□□□ -2.4
HLA-DQA1P01909 Y_RNA.454-201ENST00000384224 113 ntBASIC0.08□□□□□ -2.4
HLA-DQA1P01909 RNA5SP299-201ENST00000391203 116 ntBASIC0.08□□□□□ -2.4
HLA-DQA1P01909 MTCYBP6-201ENST00000441810 138 ntBASIC0.08□□□□□ -2.4
HLA-DQA1P01909 AC069271.1-201ENST00000445577 156 ntBASIC0.08□□□□□ -2.4
HLA-DQA1P01909 SNORA62.5-201ENST00000516634 120 ntBASIC0.08□□□□□ -2.4
HLA-DQA1P01909 Y_RNA.701-201ENST00000516812 110 ntBASIC0.08□□□□□ -2.4
HLA-DQA1P01909 RNA5SP268-201ENST00000516828 124 ntBASIC0.08□□□□□ -2.4
HLA-DQA1P01909 MIR4643-201ENST00000577473 78 ntBASIC0.08□□□□□ -2.4
HLA-DQA1P01909 RN7SL793P-201ENST00000583259 296 ntBASIC0.08□□□□□ -2.4
HLA-DQA1P01909 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.08□□□□□ -2.4
HLA-DQA1P01909 AC010487.4-201ENST00000637027 61 ntBASIC0.08□□□□□ -2.4
HLA-DQA1P01909 RNU6-728P-201ENST00000365375 104 ntBASIC0.07□□□□□ -2.4
HLA-DQA1P01909 MT-TW-201ENST00000387382 68 ntBASIC0.07□□□□□ -2.4
HLA-DQA1P01909 RNU2-59P-201ENST00000410482 191 ntBASIC0.07□□□□□ -2.4
HLA-DQA1P01909 RNU6-469P-201ENST00000516253 101 ntBASIC0.07□□□□□ -2.4
HLA-DQA1P01909 Y_RNA.673-201ENST00000516306 88 ntBASIC0.07□□□□□ -2.4
HLA-DQA1P01909 AP003327.1-201ENST00000529684 127 ntBASIC0.07□□□□□ -2.4
HLA-DQA1P01909 PVT1_3.1-201ENST00000620853 95 ntBASIC0.07□□□□□ -2.4
HLA-DQA1P01909 AC021613.1-201ENST00000623880 111 ntBASIC0.07□□□□□ -2.4
HLA-DQA1P01909 MIR4315-1-201ENST00000636800 73 ntBASIC0.07□□□□□ -2.4
HLA-DQA1P01909 MIR6841-201ENST00000637129 72 ntBASIC0.07□□□□□ -2.4
HLA-DQA1P01909 MIR4315-2-201ENST00000640925 73 ntBASIC0.07□□□□□ -2.4
HLA-DQA1P01909 SNORA22.1-201ENST00000362701 134 ntBASIC0.06□□□□□ -2.4
HLA-DQA1P01909 RNU6-238P-201ENST00000363313 106 ntBASIC0.06□□□□□ -2.4
HLA-DQA1P01909 RNU4-67P-201ENST00000364569 141 ntBASIC0.06□□□□□ -2.4
HLA-DQA1P01909 RNU6-639P-201ENST00000384074 107 ntBASIC0.06□□□□□ -2.4
HLA-DQA1P01909 Y_RNA.483-201ENST00000384380 101 ntBASIC0.06□□□□□ -2.4
HLA-DQA1P01909 SNORA72.6-201ENST00000384520 129 ntBASIC0.06□□□□□ -2.4
HLA-DQA1P01909 SUMO1P3-201ENST00000439961 304 ntBASIC0.06□□□□□ -2.4
HLA-DQA1P01909 MTATP8P1-201ENST00000467115 207 ntBASIC0.06□□□□□ -2.4
HLA-DQA1P01909 RNU6-1153P-201ENST00000516760 105 ntBASIC0.06□□□□□ -2.4
HLA-DQA1P01909 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.06□□□□□ -2.4
HLA-DQA1P01909 AC112693.2-201ENST00000556538 232 ntBASIC0.06□□□□□ -2.4
HLA-DQA1P01909 MTND5P34-201ENST00000568888 325 ntBASIC0.06□□□□□ -2.4
HLA-DQA1P01909 AL365205.2-201ENST00000594586 68 ntBASIC0.06□□□□□ -2.4
HLA-DQA1P01909 MIR7107-201ENST00000611489 80 ntBASIC0.06□□□□□ -2.4
HLA-DQA1P01909 MIR6755-201ENST00000619993 66 ntBASIC0.06□□□□□ -2.4
HLA-DQA1P01909 MIR335-201ENST00000362173 94 ntBASIC0.05□□□□□ -2.4
HLA-DQA1P01909 RNU6-949P-201ENST00000384040 107 ntBASIC0.05□□□□□ -2.4
HLA-DQA1P01909 SNORA18-201ENST00000384416 132 ntBASIC0.05□□□□□ -2.4
HLA-DQA1P01909 SNORA20-201ENST00000384662 132 ntBASIC0.05□□□□□ -2.4
HLA-DQA1P01909 MIR193B-201ENST00000384907 83 ntBASIC0.05□□□□□ -2.4
HLA-DQA1P01909 SNORA79-201ENST00000408376 140 ntBASIC0.05□□□□□ -2.4
HLA-DQA1P01909 RNU6-635P-201ENST00000516651 102 ntBASIC0.05□□□□□ -2.4
HLA-DQA1P01909 SNORA25.16-201ENST00000516741 121 ntBASIC0.05□□□□□ -2.4
HLA-DQA1P01909 RNU6-1258P-201ENST00000516911 111 ntBASIC0.05□□□□□ -2.4
HLA-DQA1P01909 Y_RNA.76-201ENST00000362931 109 ntBASIC0.04□□□□□ -2.4
HLA-DQA1P01909 RNU4-16P-201ENST00000364737 141 ntBASIC0.04□□□□□ -2.4
HLA-DQA1P01909 RNY1P13-201ENST00000365030 105 ntBASIC0.04□□□□□ -2.4
HLA-DQA1P01909 RNU4-17P-201ENST00000365598 141 ntBASIC0.04□□□□□ -2.4
HLA-DQA1P01909 Y_RNA.393-201ENST00000383936 102 ntBASIC0.04□□□□□ -2.4
HLA-DQA1P01909 RNU6-187P-201ENST00000384139 106 ntBASIC0.04□□□□□ -2.4
HLA-DQA1P01909 Y_RNA.536-201ENST00000384621 113 ntBASIC0.04□□□□□ -2.4
HLA-DQA1P01909 RNU6-291P-201ENST00000384720 107 ntBASIC0.04□□□□□ -2.4
HLA-DQA1P01909 RNU6-713P-201ENST00000384761 107 ntBASIC0.04□□□□□ -2.4
HLA-DQA1P01909 MIR613-201ENST00000385248 95 ntBASIC0.04□□□□□ -2.4
HLA-DQA1P01909 RNU4-43P-201ENST00000410628 137 ntBASIC0.04□□□□□ -2.4
HLA-DQA1P01909 AL121914.1-201ENST00000450188 156 ntBASIC0.04□□□□□ -2.4
HLA-DQA1P01909 RNY3P16-201ENST00000516338 101 ntBASIC0.04□□□□□ -2.4
HLA-DQA1P01909 SCARNA15-202ENST00000516881 127 ntBASIC0.04□□□□□ -2.4
HLA-DQA1P01909 RNU7-70P-201ENST00000516941 66 ntBASIC0.04□□□□□ -2.4
HLA-DQA1P01909 AC011921.3-201ENST00000605540 361 ntBASIC0.04□□□□□ -2.4
HLA-DQA1P01909 MIR6828-201ENST00000636181 60 ntBASIC0.04□□□□□ -2.4
HLA-DQA1P01909 MTND5P32-201ENST00000560711 1802 ntBASIC0.03□□□□□ -2.4
HLA-DQA1P01909 RNA5SP214-201ENST00000363378 118 ntBASIC0.03□□□□□ -2.4
HLA-DQA1P01909 Y_RNA.174-201ENST00000363781 105 ntBASIC0.03□□□□□ -2.4
HLA-DQA1P01909 SNORD114-9-201ENST00000364370 72 ntBASIC0.03□□□□□ -2.4
HLA-DQA1P01909 RNU6-978P-201ENST00000364371 103 ntBASIC0.03□□□□□ -2.4
HLA-DQA1P01909 Y_RNA.423-201ENST00000384057 113 ntBASIC0.03□□□□□ -2.4
HLA-DQA1P01909 Y_RNA.539-201ENST00000384635 107 ntBASIC0.03□□□□□ -2.4
HLA-DQA1P01909 SNORD28-201ENST00000384706 75 ntBASIC0.03□□□□□ -2.4
HLA-DQA1P01909 RNU6-535P-201ENST00000384722 107 ntBASIC0.03□□□□□ -2.4
HLA-DQA1P01909 MIR1302-6-201ENST00000408466 90 ntBASIC0.03□□□□□ -2.4
HLA-DQA1P01909 RNU6-1232P-201ENST00000516299 86 ntBASIC0.03□□□□□ -2.4
HLA-DQA1P01909 RNU6-765P-201ENST00000516916 99 ntBASIC0.03□□□□□ -2.4
HLA-DQA1P01909 RNA5SP47-201ENST00000517230 109 ntBASIC0.03□□□□□ -2.4
HLA-DQA1P01909 MIR8062-201ENST00000621515 85 ntBASIC0.03□□□□□ -2.4
HLA-DQA1P01909 RNU6-797P-201ENST00000363101 109 ntBASIC0.02□□□□□ -2.41
HLA-DQA1P01909 Y_RNA.171-201ENST00000363760 102 ntBASIC0.02□□□□□ -2.41
HLA-DQA1P01909 Y_RNA.262-201ENST00000364641 102 ntBASIC0.02□□□□□ -2.41
HLA-DQA1P01909 Y_RNA.277-201ENST00000364754 102 ntBASIC0.02□□□□□ -2.41
HLA-DQA1P01909 MIR489-201ENST00000384923 84 ntBASIC0.02□□□□□ -2.41
HLA-DQA1P01909 PCNPP3-201ENST00000393579 471 ntBASIC0.02□□□□□ -2.41
HLA-DQA1P01909 RNA5SP227-201ENST00000516184 113 ntBASIC0.02□□□□□ -2.41
HLA-DQA1P01909 SNORD116-25-201ENST00000516517 92 ntBASIC0.02□□□□□ -2.41
HLA-DQA1P01909 Y_RNA.697-201ENST00000516776 113 ntBASIC0.02□□□□□ -2.41
HLA-DQA1P01909 RNU6-1149P-201ENST00000516810 97 ntBASIC0.02□□□□□ -2.41
HLA-DQA1P01909 SCARNA16.5-201ENST00000517114 183 ntBASIC0.02□□□□□ -2.41
HLA-DQA1P01909 Y_RNA.757-201ENST00000578934 114 ntBASIC0.02□□□□□ -2.41
HLA-DQA1P01909 MIR378D2-201ENST00000580636 98 ntBASIC0.02□□□□□ -2.41
HLA-DQA1P01909 MIR4744-201ENST00000581563 82 ntBASIC0.02□□□□□ -2.41
HLA-DQA1P01909 AC023932.2-201ENST00000603176 175 ntBASIC0.02□□□□□ -2.41
HLA-DQA1P01909 Y_RNA.36-201ENST00000362602 112 ntBASIC0.01□□□□□ -2.41
HLA-DQA1P01909 RNU6-103P-201ENST00000363686 107 ntBASIC0.01□□□□□ -2.41
HLA-DQA1P01909 RNA5SP245-201ENST00000364239 121 ntBASIC0.01□□□□□ -2.41
HLA-DQA1P01909 Y_RNA.292-201ENST00000364904 97 ntBASIC0.01□□□□□ -2.41
HLA-DQA1P01909 Y_RNA.461-201ENST00000384263 103 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms