Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 SNORD101-201ENST00000384027 73 ntBASIC2.99□□□□□ -1.93
GFRA3O60609 RNU6-851P-201ENST00000384565 107 ntBASIC2.99□□□□□ -1.93
GFRA3O60609 SNORD67-201ENST00000390833 111 ntBASIC2.99□□□□□ -1.93
GFRA3O60609 SNORA11.4-201ENST00000408823 129 ntBASIC2.99□□□□□ -1.93
GFRA3O60609 AC244098.3-201ENST00000424803 96 ntBASIC2.99□□□□□ -1.93
GFRA3O60609 AC244023.1-201ENST00000426884 112 ntBASIC2.99□□□□□ -1.93
GFRA3O60609 AC006989.1-201ENST00000427212 131 ntBASIC2.99□□□□□ -1.93
GFRA3O60609 SNORA70.19-201ENST00000516717 90 ntBASIC2.99□□□□□ -1.93
GFRA3O60609 AC242498.1-201ENST00000604134 111 ntBASIC2.99□□□□□ -1.93
GFRA3O60609 MTRNR2L2-201ENST00000604882 87 ntBASIC2.99□□□□□ -1.93
GFRA3O60609 MIR4773-1-201ENST00000637203 78 ntBASIC2.99□□□□□ -1.93
GFRA3O60609 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.99□□□□□ -1.93
GFRA3O60609 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
GFRA3O60609 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.99□□□□□ -1.93
GFRA3O60609 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
GFRA3O60609 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
GFRA3O60609 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
GFRA3O60609 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
GFRA3O60609 RNU6-382P-201ENST00000365181 106 ntBASIC2.98□□□□□ -1.93
GFRA3O60609 RNU6-1031P-201ENST00000384773 107 ntBASIC2.98□□□□□ -1.93
GFRA3O60609 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.98□□□□□ -1.93
GFRA3O60609 AL031183.1-201ENST00000457667 207 ntBASIC2.98□□□□□ -1.93
GFRA3O60609 snoU13.2-201ENST00000459201 104 ntBASIC2.98□□□□□ -1.93
GFRA3O60609 CKS1BP2-201ENST00000497342 240 ntBASIC2.98□□□□□ -1.93
GFRA3O60609 RNA5SP309-201ENST00000516670 106 ntBASIC2.98□□□□□ -1.93
GFRA3O60609 MIR3199-1-201ENST00000582434 88 ntBASIC2.98□□□□□ -1.93
GFRA3O60609 AC110741.2-201ENST00000605278 268 ntBASIC2.98□□□□□ -1.93
GFRA3O60609 AL353997.5-201ENST00000618886 171 ntBASIC2.98□□□□□ -1.93
GFRA3O60609 U7.8-201ENST00000619968 63 ntBASIC2.98□□□□□ -1.93
GFRA3O60609 AC006111.3-201ENST00000622137 383 ntBASIC2.98□□□□□ -1.93
GFRA3O60609 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
GFRA3O60609 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.98□□□□□ -1.93
GFRA3O60609 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.98□□□□□ -1.93
GFRA3O60609 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.98□□□□□ -1.93
GFRA3O60609 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
GFRA3O60609 RNU6-859P-201ENST00000362728 107 ntBASIC2.97□□□□□ -1.93
GFRA3O60609 MIR561-201ENST00000385216 97 ntBASIC2.97□□□□□ -1.93
GFRA3O60609 SNORA75.1-201ENST00000391130 148 ntBASIC2.97□□□□□ -1.93
GFRA3O60609 RNA5SP299-201ENST00000391203 116 ntBASIC2.97□□□□□ -1.93
GFRA3O60609 RNU2-58P-201ENST00000516403 183 ntBASIC2.97□□□□□ -1.93
GFRA3O60609 MIR7157-201ENST00000635801 60 ntBASIC2.97□□□□□ -1.93
GFRA3O60609 AL021368.2-201ENST00000606125 5352 ntBASIC2.97□□□□□ -1.93
GFRA3O60609 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.97□□□□□ -1.93
GFRA3O60609 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.96□□□□□ -1.93
GFRA3O60609 MIR563-201ENST00000385080 79 ntBASIC2.96□□□□□ -1.94
GFRA3O60609 U8.13-201ENST00000390842 128 ntBASIC2.96□□□□□ -1.94
GFRA3O60609 RNU6-930P-201ENST00000390938 100 ntBASIC2.96□□□□□ -1.94
GFRA3O60609 MIR548F3-201ENST00000408509 87 ntBASIC2.96□□□□□ -1.94
GFRA3O60609 RNU6-1077P-201ENST00000410506 102 ntBASIC2.96□□□□□ -1.94
GFRA3O60609 RNU6-274P-201ENST00000459566 107 ntBASIC2.96□□□□□ -1.94
GFRA3O60609 AL078603.1-201ENST00000603824 313 ntBASIC2.96□□□□□ -1.94
GFRA3O60609 RNU6-92P-201ENST00000605893 104 ntBASIC2.96□□□□□ -1.94
GFRA3O60609 MIR6817-201ENST00000615588 66 ntBASIC2.96□□□□□ -1.94
GFRA3O60609 U6.100-201ENST00000636230 99 ntBASIC2.96□□□□□ -1.94
GFRA3O60609 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
GFRA3O60609 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
GFRA3O60609 SNORD60.1-201ENST00000362451 73 ntBASIC2.95□□□□□ -1.94
GFRA3O60609 RNU6-950P-201ENST00000384651 107 ntBASIC2.95□□□□□ -1.94
GFRA3O60609 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
GFRA3O60609 RNU6-1177P-201ENST00000391058 104 ntBASIC2.95□□□□□ -1.94
GFRA3O60609 RNA5SP229-201ENST00000410809 99 ntBASIC2.95□□□□□ -1.94
GFRA3O60609 AC011753.1-201ENST00000451001 220 ntBASIC2.95□□□□□ -1.94
GFRA3O60609 RNU7-195P-201ENST00000458793 62 ntBASIC2.95□□□□□ -1.94
GFRA3O60609 SNORA70.14-201ENST00000516205 110 ntBASIC2.95□□□□□ -1.94
GFRA3O60609 RNU7-43P-201ENST00000516554 64 ntBASIC2.95□□□□□ -1.94
GFRA3O60609 AC107016.2-201ENST00000547968 190 ntBASIC2.95□□□□□ -1.94
GFRA3O60609 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.95□□□□□ -1.94
GFRA3O60609 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
GFRA3O60609 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
GFRA3O60609 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
GFRA3O60609 RNA5SP68-201ENST00000363885 119 ntBASIC2.94□□□□□ -1.94
GFRA3O60609 SNORA67.4-201ENST00000384688 142 ntBASIC2.94□□□□□ -1.94
GFRA3O60609 SNORA26.7-201ENST00000391288 122 ntBASIC2.94□□□□□ -1.94
GFRA3O60609 HMGN2P35-201ENST00000412164 270 ntBASIC2.94□□□□□ -1.94
GFRA3O60609 TRAJ51-201ENST00000504127 63 ntBASIC2.94□□□□□ -1.94
GFRA3O60609 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
GFRA3O60609 AL355297.2-201ENST00000604792 129 ntBASIC2.94□□□□□ -1.94
GFRA3O60609 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.94□□□□□ -1.94
GFRA3O60609 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.94□□□□□ -1.94
GFRA3O60609 MAPK10-266ENST00000641066 6555 ntBASIC2.93□□□□□ -1.94
GFRA3O60609 AL023284.1-201ENST00000403956 276 ntBASIC2.93□□□□□ -1.94
GFRA3O60609 RPS29P12-201ENST00000460178 152 ntBASIC2.93□□□□□ -1.94
GFRA3O60609 RNA5SP147-201ENST00000516493 109 ntBASIC2.93□□□□□ -1.94
GFRA3O60609 SCARNA16.3-201ENST00000516595 184 ntBASIC2.93□□□□□ -1.94
GFRA3O60609 RNU6-531P-201ENST00000516694 104 ntBASIC2.93□□□□□ -1.94
GFRA3O60609 AC046143.2-201ENST00000609789 160 ntBASIC2.93□□□□□ -1.94
GFRA3O60609 UCA1.1-201ENST00000620952 75 ntBASIC2.93□□□□□ -1.94
GFRA3O60609 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
GFRA3O60609 RNU6-461P-201ENST00000364195 107 ntBASIC2.92□□□□□ -1.94
GFRA3O60609 RNA5SP148-201ENST00000516527 94 ntBASIC2.92□□□□□ -1.94
GFRA3O60609 MIR4648-201ENST00000580107 72 ntBASIC2.92□□□□□ -1.94
GFRA3O60609 SNORA4-201ENST00000584302 138 ntBASIC2.92□□□□□ -1.94
GFRA3O60609 MIR7515-201ENST00000637837 67 ntBASIC2.92□□□□□ -1.94
GFRA3O60609 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
GFRA3O60609 MIR30D-201ENST00000362283 70 ntBASIC2.91□□□□□ -1.94
GFRA3O60609 SNORA25B-201ENST00000365507 128 ntBASIC2.91□□□□□ -1.94
GFRA3O60609 MIR588-201ENST00000384900 83 ntBASIC2.91□□□□□ -1.94
GFRA3O60609 MIR451A-201ENST00000385059 72 ntBASIC2.91□□□□□ -1.94
GFRA3O60609 MIR519A1-201ENST00000385257 85 ntBASIC2.91□□□□□ -1.94
GFRA3O60609 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms