Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 BX276092.1-201ENST00000427368 251 ntBASIC2.99□□□□□ -1.93
ACTN4O43707 RNU7-26P-201ENST00000458980 63 ntBASIC2.99□□□□□ -1.93
ACTN4O43707 SNORA18.5-201ENST00000516616 101 ntBASIC2.99□□□□□ -1.93
ACTN4O43707 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ACTN4O43707 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.99□□□□□ -1.93
ACTN4O43707 MIR635-201ENST00000384830 98 ntBASIC2.98□□□□□ -1.93
ACTN4O43707 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.98□□□□□ -1.93
ACTN4O43707 RNA5SP501-201ENST00000410990 112 ntBASIC2.98□□□□□ -1.93
ACTN4O43707 AC087499.2-201ENST00000432861 149 ntBASIC2.98□□□□□ -1.93
ACTN4O43707 MIR1297-201ENST00000637311 77 ntBASIC2.98□□□□□ -1.93
ACTN4O43707 VTRNA1-1-201ENST00000363120 99 ntBASIC2.97□□□□□ -1.93
ACTN4O43707 SNORD77.2-201ENST00000391045 68 ntBASIC2.97□□□□□ -1.93
ACTN4O43707 HMGN2P35-201ENST00000412164 270 ntBASIC2.97□□□□□ -1.93
ACTN4O43707 RNU7-41P-201ENST00000515917 61 ntBASIC2.97□□□□□ -1.93
ACTN4O43707 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
ACTN4O43707 WWP1P1-201ENST00000466609 2769 ntBASIC2.97□□□□□ -1.93
ACTN4O43707 AC009487.2-201ENST00000420969 6821 ntBASIC2.96□□□□□ -1.94
ACTN4O43707 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
ACTN4O43707 RNU1-138P-201ENST00000384093 164 ntBASIC2.96□□□□□ -1.94
ACTN4O43707 RNA5SP210-201ENST00000391034 120 ntBASIC2.96□□□□□ -1.94
ACTN4O43707 HMGN2P39-201ENST00000398005 273 ntBASIC2.96□□□□□ -1.94
ACTN4O43707 HSPE1P24-201ENST00000450782 238 ntBASIC2.96□□□□□ -1.94
ACTN4O43707 AC009474.2-201ENST00000451383 136 ntBASIC2.96□□□□□ -1.94
ACTN4O43707 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.96□□□□□ -1.94
ACTN4O43707 RNA5SP445-201ENST00000515889 115 ntBASIC2.96□□□□□ -1.94
ACTN4O43707 Y_RNA.119-201ENST00000363301 96 ntBASIC2.95□□□□□ -1.94
ACTN4O43707 Y_RNA.264-201ENST00000364665 102 ntBASIC2.95□□□□□ -1.94
ACTN4O43707 Y_RNA.532-201ENST00000384590 113 ntBASIC2.95□□□□□ -1.94
ACTN4O43707 RNU6-634P-201ENST00000459134 106 ntBASIC2.95□□□□□ -1.94
ACTN4O43707 snoU13.2-201ENST00000459201 104 ntBASIC2.95□□□□□ -1.94
ACTN4O43707 AC005908.1-201ENST00000468701 347 ntBASIC2.95□□□□□ -1.94
ACTN4O43707 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.95□□□□□ -1.94
ACTN4O43707 AL357312.1-201ENST00000603879 298 ntBASIC2.95□□□□□ -1.94
ACTN4O43707 AC006023.1-201ENST00000603944 259 ntBASIC2.95□□□□□ -1.94
ACTN4O43707 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
ACTN4O43707 Z82195.2-201ENST00000612348 18351 ntBASIC2.95□□□□□ -1.94
ACTN4O43707 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.94□□□□□ -1.94
ACTN4O43707 MIR9-1-201ENST00000385198 89 ntBASIC2.94□□□□□ -1.94
ACTN4O43707 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
ACTN4O43707 RNU6-243P-201ENST00000391140 107 ntBASIC2.94□□□□□ -1.94
ACTN4O43707 AC244023.1-201ENST00000426884 112 ntBASIC2.94□□□□□ -1.94
ACTN4O43707 RNU6-322P-201ENST00000516010 103 ntBASIC2.94□□□□□ -1.94
ACTN4O43707 RNA5SP282-201ENST00000516355 108 ntBASIC2.94□□□□□ -1.94
ACTN4O43707 RNU6-687P-201ENST00000516443 89 ntBASIC2.94□□□□□ -1.94
ACTN4O43707 AC104996.3-201ENST00000590718 94 ntBASIC2.94□□□□□ -1.94
ACTN4O43707 AC242498.1-201ENST00000604134 111 ntBASIC2.94□□□□□ -1.94
ACTN4O43707 AL096861.1-201ENST00000610899 123 ntBASIC2.94□□□□□ -1.94
ACTN4O43707 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
ACTN4O43707 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
ACTN4O43707 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
ACTN4O43707 RNU6-1123P-201ENST00000362347 106 ntBASIC2.93□□□□□ -1.94
ACTN4O43707 RNU6-649P-201ENST00000384463 107 ntBASIC2.93□□□□□ -1.94
ACTN4O43707 MIR588-201ENST00000384900 83 ntBASIC2.93□□□□□ -1.94
ACTN4O43707 MIR548U-201ENST00000390728 81 ntBASIC2.93□□□□□ -1.94
ACTN4O43707 RNU6-1254P-201ENST00000391266 104 ntBASIC2.93□□□□□ -1.94
ACTN4O43707 AC015818.7-201ENST00000428754 109 ntBASIC2.93□□□□□ -1.94
ACTN4O43707 Z96811.1-201ENST00000445880 108 ntBASIC2.93□□□□□ -1.94
ACTN4O43707 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.93□□□□□ -1.94
ACTN4O43707 MIR3064-201ENST00000581130 66 ntBASIC2.93□□□□□ -1.94
ACTN4O43707 AL137790.1-201ENST00000634283 177 ntBASIC2.93□□□□□ -1.94
ACTN4O43707 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.92□□□□□ -1.94
ACTN4O43707 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ACTN4O43707 SNORD36A-201ENST00000362874 73 ntBASIC2.92□□□□□ -1.94
ACTN4O43707 MIR1265-201ENST00000408444 86 ntBASIC2.92□□□□□ -1.94
ACTN4O43707 AL033523.1-201ENST00000605153 153 ntBASIC2.92□□□□□ -1.94
ACTN4O43707 RNU6-208P-201ENST00000362431 107 ntBASIC2.91□□□□□ -1.94
ACTN4O43707 SNORD56.5-201ENST00000364281 72 ntBASIC2.91□□□□□ -1.94
ACTN4O43707 RNU6-132P-201ENST00000383863 107 ntBASIC2.91□□□□□ -1.94
ACTN4O43707 Y_RNA.491-201ENST00000384417 107 ntBASIC2.91□□□□□ -1.94
ACTN4O43707 MIR516A2-201ENST00000384888 90 ntBASIC2.91□□□□□ -1.94
ACTN4O43707 MIR516A1-201ENST00000385033 90 ntBASIC2.91□□□□□ -1.94
ACTN4O43707 DEFB122-202ENST00000569013 197 ntBASIC2.91□□□□□ -1.94
ACTN4O43707 SNORA4-201ENST00000584302 138 ntBASIC2.91□□□□□ -1.94
ACTN4O43707 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
ACTN4O43707 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
ACTN4O43707 RNU5F-1-201ENST00000362507 117 ntBASIC2.9□□□□□ -1.95
ACTN4O43707 Y_RNA.283-201ENST00000364798 112 ntBASIC2.9□□□□□ -1.95
ACTN4O43707 RNU1-51P-201ENST00000365345 176 ntBASIC2.9□□□□□ -1.95
ACTN4O43707 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
ACTN4O43707 RNU2-59P-201ENST00000410482 191 ntBASIC2.9□□□□□ -1.95
ACTN4O43707 RNU6-303P-201ENST00000517091 106 ntBASIC2.9□□□□□ -1.95
ACTN4O43707 SNORD92-201ENST00000585078 85 ntBASIC2.9□□□□□ -1.95
ACTN4O43707 U1.36-201ENST00000620684 176 ntBASIC2.9□□□□□ -1.95
ACTN4O43707 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.9□□□□□ -1.95
ACTN4O43707 RNA5SP48-201ENST00000363969 126 ntBASIC2.89□□□□□ -1.95
ACTN4O43707 RNU6-466P-201ENST00000391224 103 ntBASIC2.89□□□□□ -1.95
ACTN4O43707 RNU6-587P-201ENST00000391282 106 ntBASIC2.89□□□□□ -1.95
ACTN4O43707 SNORD30.1-201ENST00000391309 70 ntBASIC2.89□□□□□ -1.95
ACTN4O43707 SNORA31.15-201ENST00000516771 132 ntBASIC2.89□□□□□ -1.95
ACTN4O43707 PRELID3BP2-201ENST00000605362 201 ntBASIC2.89□□□□□ -1.95
ACTN4O43707 AC067747.1-201ENST00000608026 250 ntBASIC2.89□□□□□ -1.95
ACTN4O43707 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.89□□□□□ -1.95
ACTN4O43707 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ACTN4O43707 UBBP3-201ENST00000445497 241 ntBASIC2.88□□□□□ -1.95
ACTN4O43707 RNU6-75P-201ENST00000515944 104 ntBASIC2.88□□□□□ -1.95
ACTN4O43707 MIR664A-201ENST00000626086 82 ntBASIC2.88□□□□□ -1.95
ACTN4O43707 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
ACTN4O43707 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.87□□□□□ -1.95
ACTN4O43707 MIR520H-201ENST00000385126 88 ntBASIC2.87□□□□□ -1.95
ACTN4O43707 RNU6-360P-201ENST00000390944 104 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 209.1 ms