Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AL596211.1-201ENST00000569873 2277 ntBASIC1.36□□□□□ -2.19
RAI2Q9Y5P3 RNA5SP48-201ENST00000363969 126 ntBASIC1.35□□□□□ -2.19
RAI2Q9Y5P3 RNU6-915P-201ENST00000364943 103 ntBASIC1.35□□□□□ -2.19
RAI2Q9Y5P3 SNORA20-201ENST00000384662 132 ntBASIC1.35□□□□□ -2.19
RAI2Q9Y5P3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.35□□□□□ -2.19
RAI2Q9Y5P3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.35□□□□□ -2.19
RAI2Q9Y5P3 RNU1-98P-201ENST00000458992 160 ntBASIC1.35□□□□□ -2.19
RAI2Q9Y5P3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.35□□□□□ -2.19
RAI2Q9Y5P3 RNU6-958P-201ENST00000516995 106 ntBASIC1.35□□□□□ -2.19
RAI2Q9Y5P3 AL121890.5-201ENST00000620848 304 ntBASIC1.35□□□□□ -2.19
RAI2Q9Y5P3 MIR376A2-201ENST00000636782 80 ntBASIC1.35□□□□□ -2.19
RAI2Q9Y5P3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
RAI2Q9Y5P3 AC010332.2-201ENST00000613083 1904 ntBASIC1.34□□□□□ -2.19
RAI2Q9Y5P3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
RAI2Q9Y5P3 Y_RNA.568-201ENST00000384742 113 ntBASIC1.34□□□□□ -2.19
RAI2Q9Y5P3 SNORA40-201ENST00000388090 126 ntBASIC1.34□□□□□ -2.19
RAI2Q9Y5P3 RNU7-197P-201ENST00000458836 62 ntBASIC1.34□□□□□ -2.19
RAI2Q9Y5P3 HAR1A.1-201ENST00000459583 118 ntBASIC1.34□□□□□ -2.19
RAI2Q9Y5P3 RNU6-998P-201ENST00000515894 101 ntBASIC1.34□□□□□ -2.19
RAI2Q9Y5P3 Y_RNA.690-201ENST00000516603 95 ntBASIC1.34□□□□□ -2.19
RAI2Q9Y5P3 Y_RNA.692-201ENST00000516627 105 ntBASIC1.34□□□□□ -2.19
RAI2Q9Y5P3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.34□□□□□ -2.19
RAI2Q9Y5P3 Y_RNA.757-201ENST00000578934 114 ntBASIC1.34□□□□□ -2.19
RAI2Q9Y5P3 MIR4251-201ENST00000635819 61 ntBASIC1.34□□□□□ -2.19
RAI2Q9Y5P3 Y_RNA.494-201ENST00000384432 111 ntBASIC1.33□□□□□ -2.2
RAI2Q9Y5P3 MIR758-201ENST00000390227 88 ntBASIC1.33□□□□□ -2.2
RAI2Q9Y5P3 RNU6-955P-201ENST00000410497 104 ntBASIC1.33□□□□□ -2.2
RAI2Q9Y5P3 RNU2-11P-201ENST00000459191 187 ntBASIC1.33□□□□□ -2.2
RAI2Q9Y5P3 RNA5SP272-201ENST00000516095 111 ntBASIC1.33□□□□□ -2.2
RAI2Q9Y5P3 RNU6-970P-201ENST00000516312 107 ntBASIC1.33□□□□□ -2.2
RAI2Q9Y5P3 AL512310.8-201ENST00000550183 120 ntBASIC1.33□□□□□ -2.2
RAI2Q9Y5P3 AC011603.4-201ENST00000611325 277 ntBASIC1.33□□□□□ -2.2
RAI2Q9Y5P3 TUG1_4.1-201ENST00000619464 181 ntBASIC1.33□□□□□ -2.2
RAI2Q9Y5P3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
RAI2Q9Y5P3 AC091932.4-201ENST00000623386 200 ntBASIC1.33□□□□□ -2.2
RAI2Q9Y5P3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
RAI2Q9Y5P3 SNORD50.2-201ENST00000365465 70 ntBASIC1.32□□□□□ -2.2
RAI2Q9Y5P3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
RAI2Q9Y5P3 TMSB4XP3-201ENST00000445144 114 ntBASIC1.32□□□□□ -2.2
RAI2Q9Y5P3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.32□□□□□ -2.2
RAI2Q9Y5P3 AC004223.1-201ENST00000479840 271 ntBASIC1.32□□□□□ -2.2
RAI2Q9Y5P3 RNU7-41P-201ENST00000515917 61 ntBASIC1.32□□□□□ -2.2
RAI2Q9Y5P3 RN7SKP88-201ENST00000516847 250 ntBASIC1.32□□□□□ -2.2
RAI2Q9Y5P3 SCARNA15-202ENST00000516881 127 ntBASIC1.32□□□□□ -2.2
RAI2Q9Y5P3 MIR3664-201ENST00000579074 99 ntBASIC1.32□□□□□ -2.2
RAI2Q9Y5P3 U7.2-201ENST00000607576 63 ntBASIC1.32□□□□□ -2.2
RAI2Q9Y5P3 7SK.8-201ENST00000612110 250 ntBASIC1.32□□□□□ -2.2
RAI2Q9Y5P3 7SK.11-201ENST00000615477 250 ntBASIC1.32□□□□□ -2.2
RAI2Q9Y5P3 MIR7974-201ENST00000615835 79 ntBASIC1.32□□□□□ -2.2
RAI2Q9Y5P3 7SK.13-201ENST00000622040 250 ntBASIC1.32□□□□□ -2.2
RAI2Q9Y5P3 AP001340.1-201ENST00000624405 217 ntBASIC1.32□□□□□ -2.2
RAI2Q9Y5P3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
RAI2Q9Y5P3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
RAI2Q9Y5P3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.32□□□□□ -2.2
RAI2Q9Y5P3 RNY1P11-201ENST00000363759 113 ntBASIC1.31□□□□□ -2.2
RAI2Q9Y5P3 RNU6-704P-201ENST00000364162 103 ntBASIC1.31□□□□□ -2.2
RAI2Q9Y5P3 MIR193B-201ENST00000384907 83 ntBASIC1.31□□□□□ -2.2
RAI2Q9Y5P3 AL603914.1-201ENST00000401964 204 ntBASIC1.31□□□□□ -2.2
RAI2Q9Y5P3 RNA5SP261-201ENST00000410536 106 ntBASIC1.31□□□□□ -2.2
RAI2Q9Y5P3 RPS27P16-201ENST00000425758 201 ntBASIC1.31□□□□□ -2.2
RAI2Q9Y5P3 snoU13.16-201ENST00000459350 104 ntBASIC1.31□□□□□ -2.2
RAI2Q9Y5P3 RNU2-13P-201ENST00000515909 113 ntBASIC1.31□□□□□ -2.2
RAI2Q9Y5P3 Y_RNA.686-201ENST00000516548 134 ntBASIC1.31□□□□□ -2.2
RAI2Q9Y5P3 RNU6-902P-201ENST00000517212 91 ntBASIC1.31□□□□□ -2.2
RAI2Q9Y5P3 MIR1273G-201ENST00000577677 100 ntBASIC1.31□□□□□ -2.2
RAI2Q9Y5P3 SNORA24-201ENST00000384096 131 ntBASIC1.3□□□□□ -2.2
RAI2Q9Y5P3 MIR222-201ENST00000384992 110 ntBASIC1.3□□□□□ -2.2
RAI2Q9Y5P3 SNORA40.6-201ENST00000391153 128 ntBASIC1.3□□□□□ -2.2
RAI2Q9Y5P3 RNU4-61P-201ENST00000411243 107 ntBASIC1.3□□□□□ -2.2
RAI2Q9Y5P3 AL392103.1-201ENST00000447000 198 ntBASIC1.3□□□□□ -2.2
RAI2Q9Y5P3 AC068338.1-201ENST00000565567 176 ntBASIC1.3□□□□□ -2.2
RAI2Q9Y5P3 AL022345.2-201ENST00000606307 135 ntBASIC1.3□□□□□ -2.2
RAI2Q9Y5P3 AL096861.1-201ENST00000610899 123 ntBASIC1.3□□□□□ -2.2
RAI2Q9Y5P3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
RAI2Q9Y5P3 Y_RNA.115-201ENST00000363272 98 ntBASIC1.29□□□□□ -2.2
RAI2Q9Y5P3 RNU6-690P-201ENST00000365242 106 ntBASIC1.29□□□□□ -2.2
RAI2Q9Y5P3 MIR539-201ENST00000365690 78 ntBASIC1.29□□□□□ -2.2
RAI2Q9Y5P3 RNY1P6-201ENST00000384193 109 ntBASIC1.29□□□□□ -2.2
RAI2Q9Y5P3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.29□□□□□ -2.2
RAI2Q9Y5P3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.29□□□□□ -2.2
RAI2Q9Y5P3 RNU7-73P-201ENST00000458743 63 ntBASIC1.29□□□□□ -2.2
RAI2Q9Y5P3 RNA5SP236-201ENST00000516169 116 ntBASIC1.29□□□□□ -2.2
RAI2Q9Y5P3 MIR3152-201ENST00000579801 74 ntBASIC1.29□□□□□ -2.2
RAI2Q9Y5P3 MIR3660-201ENST00000584845 100 ntBASIC1.29□□□□□ -2.2
RAI2Q9Y5P3 MIR6767-201ENST00000637302 66 ntBASIC1.29□□□□□ -2.2
RAI2Q9Y5P3 RNU6-309P-201ENST00000364573 106 ntBASIC1.28□□□□□ -2.2
RAI2Q9Y5P3 RNU6-257P-201ENST00000410238 98 ntBASIC1.28□□□□□ -2.2
RAI2Q9Y5P3 MTND4LP9-201ENST00000427694 174 ntBASIC1.28□□□□□ -2.2
RAI2Q9Y5P3 RNU6-113P-201ENST00000516653 101 ntBASIC1.28□□□□□ -2.2
RAI2Q9Y5P3 RNU2-60P-201ENST00000517290 128 ntBASIC1.28□□□□□ -2.2
RAI2Q9Y5P3 MIR5000-201ENST00000577717 103 ntBASIC1.28□□□□□ -2.2
RAI2Q9Y5P3 MIR3192-201ENST00000584920 77 ntBASIC1.28□□□□□ -2.2
RAI2Q9Y5P3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.28□□□□□ -2.2
RAI2Q9Y5P3 SNORA1.1-201ENST00000364671 133 ntBASIC1.27□□□□□ -2.21
RAI2Q9Y5P3 RNU6-1211P-201ENST00000459179 105 ntBASIC1.27□□□□□ -2.21
RAI2Q9Y5P3 AL133373.1-201ENST00000497098 94 ntBASIC1.27□□□□□ -2.21
RAI2Q9Y5P3 CYP3A52P-201ENST00000563326 91 ntBASIC1.27□□□□□ -2.21
RAI2Q9Y5P3 MIR8065-201ENST00000620577 100 ntBASIC1.27□□□□□ -2.21
RAI2Q9Y5P3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.26□□□□□ -2.21
RAI2Q9Y5P3 SNORA25.3-201ENST00000363205 127 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms