Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC022137.1-201ENST00000483735 151 ntBASIC2.54□□□□□ -2
PCDHGA11Q9Y5H2 SNORD111.1-201ENST00000516421 86 ntBASIC2.54□□□□□ -2
PCDHGA11Q9Y5H2 RNU7-137P-201ENST00000516788 62 ntBASIC2.54□□□□□ -2
PCDHGA11Q9Y5H2 RNA5SP402-201ENST00000517148 110 ntBASIC2.54□□□□□ -2
PCDHGA11Q9Y5H2 AC079600.2-201ENST00000550076 130 ntBASIC2.54□□□□□ -2
PCDHGA11Q9Y5H2 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
PCDHGA11Q9Y5H2 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.53□□□□□ -2
PCDHGA11Q9Y5H2 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PCDHGA11Q9Y5H2 MIR6073-201ENST00000352083 89 ntBASIC2.53□□□□□ -2
PCDHGA11Q9Y5H2 RNU6-1163P-201ENST00000364516 107 ntBASIC2.53□□□□□ -2
PCDHGA11Q9Y5H2 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.53□□□□□ -2
PCDHGA11Q9Y5H2 SNORD78.1-201ENST00000390866 65 ntBASIC2.53□□□□□ -2
PCDHGA11Q9Y5H2 RNU6-1275P-201ENST00000391087 107 ntBASIC2.53□□□□□ -2
PCDHGA11Q9Y5H2 RNA5SP181-201ENST00000410246 98 ntBASIC2.53□□□□□ -2
PCDHGA11Q9Y5H2 RPS12P2-201ENST00000439728 269 ntBASIC2.53□□□□□ -2
PCDHGA11Q9Y5H2 AC009474.2-201ENST00000451383 136 ntBASIC2.53□□□□□ -2
PCDHGA11Q9Y5H2 RNU7-48P-201ENST00000458875 63 ntBASIC2.53□□□□□ -2
PCDHGA11Q9Y5H2 AL137847.3-201ENST00000611521 109 ntBASIC2.53□□□□□ -2
PCDHGA11Q9Y5H2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.53□□□□□ -2
PCDHGA11Q9Y5H2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
PCDHGA11Q9Y5H2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
PCDHGA11Q9Y5H2 RNA5SP276-201ENST00000362580 94 ntBASIC2.52□□□□□ -2.01
PCDHGA11Q9Y5H2 Y_RNA.567-201ENST00000384736 106 ntBASIC2.52□□□□□ -2.01
PCDHGA11Q9Y5H2 MIR483-201ENST00000385070 76 ntBASIC2.52□□□□□ -2.01
PCDHGA11Q9Y5H2 RNU6-1321P-201ENST00000390905 107 ntBASIC2.52□□□□□ -2.01
PCDHGA11Q9Y5H2 MIR548G-201ENST00000408442 89 ntBASIC2.52□□□□□ -2.01
PCDHGA11Q9Y5H2 RPL39P39-201ENST00000455840 151 ntBASIC2.52□□□□□ -2.01
PCDHGA11Q9Y5H2 RNA5SP282-201ENST00000516355 108 ntBASIC2.52□□□□□ -2.01
PCDHGA11Q9Y5H2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.52□□□□□ -2.01
PCDHGA11Q9Y5H2 MIR5092-201ENST00000583139 88 ntBASIC2.52□□□□□ -2.01
PCDHGA11Q9Y5H2 AC103810.7-201ENST00000607821 91 ntBASIC2.52□□□□□ -2.01
PCDHGA11Q9Y5H2 AC105081.1-201ENST00000617727 106 ntBASIC2.52□□□□□ -2.01
PCDHGA11Q9Y5H2 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PCDHGA11Q9Y5H2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.52□□□□□ -2.01
PCDHGA11Q9Y5H2 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
PCDHGA11Q9Y5H2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
PCDHGA11Q9Y5H2 RNU6-675P-201ENST00000384236 104 ntBASIC2.51□□□□□ -2.01
PCDHGA11Q9Y5H2 RNU6-402P-201ENST00000410678 103 ntBASIC2.51□□□□□ -2.01
PCDHGA11Q9Y5H2 SPINT5P-201ENST00000448174 155 ntBASIC2.51□□□□□ -2.01
PCDHGA11Q9Y5H2 RNU6-638P-201ENST00000516582 104 ntBASIC2.51□□□□□ -2.01
PCDHGA11Q9Y5H2 AC133485.1-201ENST00000567176 124 ntBASIC2.51□□□□□ -2.01
PCDHGA11Q9Y5H2 MIR5194-201ENST00000582634 120 ntBASIC2.51□□□□□ -2.01
PCDHGA11Q9Y5H2 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.51□□□□□ -2.01
PCDHGA11Q9Y5H2 RNY1P13-201ENST00000365030 105 ntBASIC2.5□□□□□ -2.01
PCDHGA11Q9Y5H2 RNU6-1307P-201ENST00000391012 103 ntBASIC2.5□□□□□ -2.01
PCDHGA11Q9Y5H2 RNA5SP210-201ENST00000391034 120 ntBASIC2.5□□□□□ -2.01
PCDHGA11Q9Y5H2 AC019129.1-201ENST00000403786 261 ntBASIC2.5□□□□□ -2.01
PCDHGA11Q9Y5H2 MTND5P40-201ENST00000559945 246 ntBASIC2.5□□□□□ -2.01
PCDHGA11Q9Y5H2 AP001362.1-201ENST00000625165 124 ntBASIC2.5□□□□□ -2.01
PCDHGA11Q9Y5H2 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.5□□□□□ -2.01
PCDHGA11Q9Y5H2 MIR3202-2-201ENST00000635980 79 ntBASIC2.5□□□□□ -2.01
PCDHGA11Q9Y5H2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PCDHGA11Q9Y5H2 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PCDHGA11Q9Y5H2 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
PCDHGA11Q9Y5H2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PCDHGA11Q9Y5H2 RNU6-859P-201ENST00000362728 107 ntBASIC2.49□□□□□ -2.01
PCDHGA11Q9Y5H2 RNA5SP138-201ENST00000365098 114 ntBASIC2.49□□□□□ -2.01
PCDHGA11Q9Y5H2 AC027119.1-201ENST00000440877 241 ntBASIC2.49□□□□□ -2.01
PCDHGA11Q9Y5H2 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.49□□□□□ -2.01
PCDHGA11Q9Y5H2 RNU6-922P-201ENST00000516753 99 ntBASIC2.49□□□□□ -2.01
PCDHGA11Q9Y5H2 AC141846.1-201ENST00000568348 142 ntBASIC2.49□□□□□ -2.01
PCDHGA11Q9Y5H2 AL773524.1-201ENST00000614065 229 ntBASIC2.49□□□□□ -2.01
PCDHGA11Q9Y5H2 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PCDHGA11Q9Y5H2 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
PCDHGA11Q9Y5H2 SNORA67.1-201ENST00000364749 141 ntBASIC2.48□□□□□ -2.01
PCDHGA11Q9Y5H2 COTL1P1-201ENST00000422309 375 ntBASIC2.48□□□□□ -2.01
PCDHGA11Q9Y5H2 MIR4668-201ENST00000582284 70 ntBASIC2.48□□□□□ -2.01
PCDHGA11Q9Y5H2 AC067747.1-201ENST00000608026 250 ntBASIC2.48□□□□□ -2.01
PCDHGA11Q9Y5H2 RNU6-396P-201ENST00000365369 105 ntBASIC2.47□□□□□ -2.01
PCDHGA11Q9Y5H2 RNU6-1276P-201ENST00000365372 104 ntBASIC2.47□□□□□ -2.01
PCDHGA11Q9Y5H2 AC244636.1-201ENST00000421152 228 ntBASIC2.47□□□□□ -2.01
PCDHGA11Q9Y5H2 HSPE1P24-201ENST00000450782 238 ntBASIC2.47□□□□□ -2.01
PCDHGA11Q9Y5H2 SNORD109B-201ENST00000458961 67 ntBASIC2.47□□□□□ -2.01
PCDHGA11Q9Y5H2 SNORD109A-201ENST00000459128 67 ntBASIC2.47□□□□□ -2.01
PCDHGA11Q9Y5H2 GTF3AP2-201ENST00000557014 266 ntBASIC2.47□□□□□ -2.01
PCDHGA11Q9Y5H2 GHRLOS.1-201ENST00000610995 70 ntBASIC2.47□□□□□ -2.01
PCDHGA11Q9Y5H2 AL662814.1-201ENST00000617364 121 ntBASIC2.47□□□□□ -2.01
PCDHGA11Q9Y5H2 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.47□□□□□ -2.01
PCDHGA11Q9Y5H2 WWP1P1-201ENST00000466609 2769 ntBASIC2.47□□□□□ -2.01
PCDHGA11Q9Y5H2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
PCDHGA11Q9Y5H2 RNU6-497P-201ENST00000365316 104 ntBASIC2.46□□□□□ -2.02
PCDHGA11Q9Y5H2 SNORA6-201ENST00000384033 151 ntBASIC2.46□□□□□ -2.02
PCDHGA11Q9Y5H2 SNORD41-201ENST00000386967 70 ntBASIC2.46□□□□□ -2.02
PCDHGA11Q9Y5H2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
PCDHGA11Q9Y5H2 AC121758.2-201ENST00000553271 193 ntBASIC2.46□□□□□ -2.02
PCDHGA11Q9Y5H2 PRELID3BP2-201ENST00000605362 201 ntBASIC2.46□□□□□ -2.02
PCDHGA11Q9Y5H2 MIR7106-201ENST00000612419 65 ntBASIC2.46□□□□□ -2.02
PCDHGA11Q9Y5H2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.46□□□□□ -2.02
PCDHGA11Q9Y5H2 AC012676.2-201ENST00000619258 186 ntBASIC2.46□□□□□ -2.02
PCDHGA11Q9Y5H2 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
PCDHGA11Q9Y5H2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.46□□□□□ -2.02
PCDHGA11Q9Y5H2 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
PCDHGA11Q9Y5H2 RNU6-1125P-201ENST00000363601 107 ntBASIC2.45□□□□□ -2.02
PCDHGA11Q9Y5H2 RNU6-1244P-201ENST00000363614 108 ntBASIC2.45□□□□□ -2.02
PCDHGA11Q9Y5H2 RNU6-480P-201ENST00000384332 107 ntBASIC2.45□□□□□ -2.02
PCDHGA11Q9Y5H2 RNY1P4-201ENST00000384595 115 ntBASIC2.45□□□□□ -2.02
PCDHGA11Q9Y5H2 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
PCDHGA11Q9Y5H2 Y_RNA.620-201ENST00000411009 88 ntBASIC2.45□□□□□ -2.02
PCDHGA11Q9Y5H2 snoU13.2-201ENST00000459201 104 ntBASIC2.45□□□□□ -2.02
PCDHGA11Q9Y5H2 MIR4287-201ENST00000579398 78 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms