Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 Y_RNA.596-201ENST00000410462 109 ntBASIC2.88□□□□□ -1.95
COL25A1Q9BXS0 AC074348.1-201ENST00000426503 132 ntBASIC2.88□□□□□ -1.95
COL25A1Q9BXS0 snoU13.16-201ENST00000459350 104 ntBASIC2.88□□□□□ -1.95
COL25A1Q9BXS0 RNU7-12P-201ENST00000516030 62 ntBASIC2.88□□□□□ -1.95
COL25A1Q9BXS0 MIR1273D-201ENST00000577266 86 ntBASIC2.88□□□□□ -1.95
COL25A1Q9BXS0 MIR3169-201ENST00000578032 83 ntBASIC2.88□□□□□ -1.95
COL25A1Q9BXS0 Y_RNA.537-201ENST00000384626 109 ntBASIC2.87□□□□□ -1.95
COL25A1Q9BXS0 RNA5SP292-201ENST00000390974 118 ntBASIC2.87□□□□□ -1.95
COL25A1Q9BXS0 SNORA26.7-201ENST00000391288 122 ntBASIC2.87□□□□□ -1.95
COL25A1Q9BXS0 RNU4-83P-201ENST00000410863 133 ntBASIC2.87□□□□□ -1.95
COL25A1Q9BXS0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
COL25A1Q9BXS0 HSPE1P9-201ENST00000440046 311 ntBASIC2.87□□□□□ -1.95
COL25A1Q9BXS0 AC093850.1-201ENST00000454121 251 ntBASIC2.87□□□□□ -1.95
COL25A1Q9BXS0 Y_RNA.648-201ENST00000459455 110 ntBASIC2.87□□□□□ -1.95
COL25A1Q9BXS0 SNORD123-201ENST00000459473 70 ntBASIC2.87□□□□□ -1.95
COL25A1Q9BXS0 AC022513.1-201ENST00000624512 117 ntBASIC2.87□□□□□ -1.95
COL25A1Q9BXS0 Z97988.1-201ENST00000637697 135 ntBASIC2.87□□□□□ -1.95
COL25A1Q9BXS0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL25A1Q9BXS0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL25A1Q9BXS0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL25A1Q9BXS0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.86□□□□□ -1.95
COL25A1Q9BXS0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
COL25A1Q9BXS0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL25A1Q9BXS0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
COL25A1Q9BXS0 SNORA25B-201ENST00000365507 128 ntBASIC2.86□□□□□ -1.95
COL25A1Q9BXS0 RNU6-499P-201ENST00000365615 107 ntBASIC2.86□□□□□ -1.95
COL25A1Q9BXS0 SNORD77.2-201ENST00000391045 68 ntBASIC2.86□□□□□ -1.95
COL25A1Q9BXS0 AL034345.1-201ENST00000407768 123 ntBASIC2.86□□□□□ -1.95
COL25A1Q9BXS0 RNU6-141P-201ENST00000410499 105 ntBASIC2.86□□□□□ -1.95
COL25A1Q9BXS0 RPS29P11-201ENST00000496507 171 ntBASIC2.86□□□□□ -1.95
COL25A1Q9BXS0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.86□□□□□ -1.95
COL25A1Q9BXS0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
COL25A1Q9BXS0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
COL25A1Q9BXS0 RNU1-17P-201ENST00000363022 152 ntBASIC2.85□□□□□ -1.95
COL25A1Q9BXS0 RNU6-811P-201ENST00000384069 107 ntBASIC2.85□□□□□ -1.95
COL25A1Q9BXS0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
COL25A1Q9BXS0 RPL23AP6-201ENST00000446637 472 ntBASIC2.85□□□□□ -1.95
COL25A1Q9BXS0 AC023141.11-201ENST00000508864 202 ntBASIC2.85□□□□□ -1.95
COL25A1Q9BXS0 SNORA18.5-201ENST00000516616 101 ntBASIC2.85□□□□□ -1.95
COL25A1Q9BXS0 RNU6-303P-201ENST00000517091 106 ntBASIC2.85□□□□□ -1.95
COL25A1Q9BXS0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.85□□□□□ -1.95
COL25A1Q9BXS0 SNORA4-201ENST00000584302 138 ntBASIC2.85□□□□□ -1.95
COL25A1Q9BXS0 SNORD14A-201ENST00000606526 91 ntBASIC2.85□□□□□ -1.95
COL25A1Q9BXS0 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.85□□□□□ -1.95
COL25A1Q9BXS0 MIR6779-201ENST00000617283 64 ntBASIC2.85□□□□□ -1.95
COL25A1Q9BXS0 AC007318.2-201ENST00000620999 243 ntBASIC2.85□□□□□ -1.95
COL25A1Q9BXS0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.85□□□□□ -1.95
COL25A1Q9BXS0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.85□□□□□ -1.95
COL25A1Q9BXS0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
COL25A1Q9BXS0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.84□□□□□ -1.95
COL25A1Q9BXS0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
COL25A1Q9BXS0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
COL25A1Q9BXS0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
COL25A1Q9BXS0 Y_RNA.264-201ENST00000364665 102 ntBASIC2.84□□□□□ -1.95
COL25A1Q9BXS0 RNY1P13-201ENST00000365030 105 ntBASIC2.84□□□□□ -1.95
COL25A1Q9BXS0 RNU6-663P-201ENST00000391105 106 ntBASIC2.84□□□□□ -1.95
COL25A1Q9BXS0 SNORA11.4-201ENST00000408823 129 ntBASIC2.84□□□□□ -1.95
COL25A1Q9BXS0 RNU6-711P-201ENST00000517255 106 ntBASIC2.84□□□□□ -1.95
COL25A1Q9BXS0 MIR4738-201ENST00000579134 87 ntBASIC2.84□□□□□ -1.95
COL25A1Q9BXS0 AP000753.3-201ENST00000604083 169 ntBASIC2.84□□□□□ -1.95
COL25A1Q9BXS0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.84□□□□□ -1.95
COL25A1Q9BXS0 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.84□□□□□ -1.95
COL25A1Q9BXS0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
COL25A1Q9BXS0 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL25A1Q9BXS0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.83□□□□□ -1.96
COL25A1Q9BXS0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL25A1Q9BXS0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.83□□□□□ -1.96
COL25A1Q9BXS0 Y_RNA.224-201ENST00000364308 111 ntBASIC2.83□□□□□ -1.96
COL25A1Q9BXS0 SNORA68.1-201ENST00000364537 132 ntBASIC2.83□□□□□ -1.96
COL25A1Q9BXS0 SNORD115-31-201ENST00000365318 82 ntBASIC2.83□□□□□ -1.96
COL25A1Q9BXS0 RNU6-805P-201ENST00000365643 106 ntBASIC2.83□□□□□ -1.96
COL25A1Q9BXS0 RNU6-1241P-201ENST00000384536 107 ntBASIC2.83□□□□□ -1.96
COL25A1Q9BXS0 MIR9-2-201ENST00000384838 87 ntBASIC2.83□□□□□ -1.96
COL25A1Q9BXS0 SNRPGP12-201ENST00000449481 213 ntBASIC2.83□□□□□ -1.96
COL25A1Q9BXS0 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.82□□□□□ -1.96
COL25A1Q9BXS0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.82□□□□□ -1.96
COL25A1Q9BXS0 SNORA38-201ENST00000363946 132 ntBASIC2.82□□□□□ -1.96
COL25A1Q9BXS0 RNU6-283P-201ENST00000364788 107 ntBASIC2.82□□□□□ -1.96
COL25A1Q9BXS0 CD24P4-201ENST00000382840 243 ntBASIC2.82□□□□□ -1.96
COL25A1Q9BXS0 RNU1-101P-201ENST00000391171 127 ntBASIC2.82□□□□□ -1.96
COL25A1Q9BXS0 AC108667.1-201ENST00000428618 249 ntBASIC2.82□□□□□ -1.96
COL25A1Q9BXS0 AC093423.1-201ENST00000440817 142 ntBASIC2.82□□□□□ -1.96
COL25A1Q9BXS0 RPS27P29-201ENST00000463110 252 ntBASIC2.82□□□□□ -1.96
COL25A1Q9BXS0 AC005908.1-201ENST00000468701 347 ntBASIC2.82□□□□□ -1.96
COL25A1Q9BXS0 RNU7-156P-201ENST00000517214 74 ntBASIC2.82□□□□□ -1.96
COL25A1Q9BXS0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.82□□□□□ -1.96
COL25A1Q9BXS0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
COL25A1Q9BXS0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
COL25A1Q9BXS0 RNU6-1019P-201ENST00000364424 107 ntBASIC2.81□□□□□ -1.96
COL25A1Q9BXS0 RNY1P2-201ENST00000364820 117 ntBASIC2.81□□□□□ -1.96
COL25A1Q9BXS0 RNU6-1067P-201ENST00000384752 107 ntBASIC2.81□□□□□ -1.96
COL25A1Q9BXS0 AC133485.1-201ENST00000567176 124 ntBASIC2.81□□□□□ -1.96
COL25A1Q9BXS0 AC005520.4-201ENST00000604337 90 ntBASIC2.81□□□□□ -1.96
COL25A1Q9BXS0 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.81□□□□□ -1.96
COL25A1Q9BXS0 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
COL25A1Q9BXS0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
COL25A1Q9BXS0 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
COL25A1Q9BXS0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.8□□□□□ -1.96
COL25A1Q9BXS0 RNU6-208P-201ENST00000362431 107 ntBASIC2.8□□□□□ -1.96
COL25A1Q9BXS0 RNU6-23P-201ENST00000363283 107 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms