Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 JPX_2.1-201ENST00000614161 69 ntBASIC0.62□□□□□ -2.31
CDX2Q99626 AC106800.4-201ENST00000614905 153 ntBASIC0.62□□□□□ -2.31
CDX2Q99626 FTX_2.1-201ENST00000618816 94 ntBASIC0.62□□□□□ -2.31
CDX2Q99626 AC015726.2-201ENST00000620112 122 ntBASIC0.62□□□□□ -2.31
CDX2Q99626 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
CDX2Q99626 HSBP1P2-201ENST00000299671 229 ntBASIC0.61□□□□□ -2.31
CDX2Q99626 Y_RNA.29-201ENST00000362570 113 ntBASIC0.61□□□□□ -2.31
CDX2Q99626 SNORA25.3-201ENST00000363205 127 ntBASIC0.61□□□□□ -2.31
CDX2Q99626 RNU6-774P-201ENST00000363238 107 ntBASIC0.61□□□□□ -2.31
CDX2Q99626 RNU6-275P-201ENST00000364910 107 ntBASIC0.61□□□□□ -2.31
CDX2Q99626 RNU6-1138P-201ENST00000365359 106 ntBASIC0.61□□□□□ -2.31
CDX2Q99626 Y_RNA.398-201ENST00000383952 99 ntBASIC0.61□□□□□ -2.31
CDX2Q99626 Y_RNA.515-201ENST00000384535 112 ntBASIC0.61□□□□□ -2.31
CDX2Q99626 RNU4-70P-201ENST00000384579 139 ntBASIC0.61□□□□□ -2.31
CDX2Q99626 SNORA20-201ENST00000384662 132 ntBASIC0.61□□□□□ -2.31
CDX2Q99626 MIR329-2-201ENST00000385029 84 ntBASIC0.61□□□□□ -2.31
CDX2Q99626 MIR548I3-201ENST00000408378 149 ntBASIC0.61□□□□□ -2.31
CDX2Q99626 MIR548O-201ENST00000408583 114 ntBASIC0.61□□□□□ -2.31
CDX2Q99626 MIR548I1-201ENST00000408810 149 ntBASIC0.61□□□□□ -2.31
CDX2Q99626 MIR1302-7-201ENST00000408841 72 ntBASIC0.61□□□□□ -2.31
CDX2Q99626 AL138752.1-201ENST00000452964 351 ntBASIC0.61□□□□□ -2.31
CDX2Q99626 RPL39P39-201ENST00000455840 151 ntBASIC0.61□□□□□ -2.31
CDX2Q99626 RNU7-120P-201ENST00000459334 63 ntBASIC0.61□□□□□ -2.31
CDX2Q99626 RNU7-45P-201ENST00000459460 63 ntBASIC0.61□□□□□ -2.31
CDX2Q99626 RNU6-947P-201ENST00000516264 106 ntBASIC0.61□□□□□ -2.31
CDX2Q99626 RNA5SP255-201ENST00000516370 107 ntBASIC0.61□□□□□ -2.31
CDX2Q99626 MIR3129-201ENST00000581095 76 ntBASIC0.61□□□□□ -2.31
CDX2Q99626 AC006441.5-201ENST00000612680 209 ntBASIC0.61□□□□□ -2.31
CDX2Q99626 Y_RNA.75-201ENST00000362927 97 ntBASIC0.6□□□□□ -2.31
CDX2Q99626 SNORD14E-201ENST00000364009 85 ntBASIC0.6□□□□□ -2.31
CDX2Q99626 Y_RNA.240-201ENST00000364469 95 ntBASIC0.6□□□□□ -2.31
CDX2Q99626 snoU2-30.1-201ENST00000365012 70 ntBASIC0.6□□□□□ -2.31
CDX2Q99626 RNU6-597P-201ENST00000365620 102 ntBASIC0.6□□□□□ -2.31
CDX2Q99626 Y_RNA.785-201ENST00000384290 109 ntBASIC0.6□□□□□ -2.31
CDX2Q99626 RNA5SP496-201ENST00000391240 109 ntBASIC0.6□□□□□ -2.31
CDX2Q99626 RNU6-588P-201ENST00000410281 105 ntBASIC0.6□□□□□ -2.31
CDX2Q99626 MIR1912-201ENST00000410389 80 ntBASIC0.6□□□□□ -2.31
CDX2Q99626 RNU6-394P-201ENST00000410735 107 ntBASIC0.6□□□□□ -2.31
CDX2Q99626 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.6□□□□□ -2.31
CDX2Q99626 SNORD123-201ENST00000459473 70 ntBASIC0.6□□□□□ -2.31
CDX2Q99626 RNU2-60P-201ENST00000517290 128 ntBASIC0.6□□□□□ -2.31
CDX2Q99626 AC023932.2-201ENST00000603176 175 ntBASIC0.6□□□□□ -2.31
CDX2Q99626 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
CDX2Q99626 Y_RNA.37-201ENST00000362606 108 ntBASIC0.59□□□□□ -2.31
CDX2Q99626 RNU6-643P-201ENST00000384018 107 ntBASIC0.59□□□□□ -2.31
CDX2Q99626 Y_RNA.432-201ENST00000384087 111 ntBASIC0.59□□□□□ -2.31
CDX2Q99626 Y_RNA.435-201ENST00000384095 112 ntBASIC0.59□□□□□ -2.31
CDX2Q99626 MIR608-201ENST00000384820 100 ntBASIC0.59□□□□□ -2.31
CDX2Q99626 RNU6-913P-201ENST00000390913 95 ntBASIC0.59□□□□□ -2.31
CDX2Q99626 U8.17-201ENST00000391292 132 ntBASIC0.59□□□□□ -2.31
CDX2Q99626 RNU7-90P-201ENST00000459216 62 ntBASIC0.59□□□□□ -2.31
CDX2Q99626 RNU6-1299P-201ENST00000516316 100 ntBASIC0.59□□□□□ -2.31
CDX2Q99626 SNORA18.4-201ENST00000516440 124 ntBASIC0.59□□□□□ -2.31
CDX2Q99626 Y_RNA.686-201ENST00000516548 134 ntBASIC0.59□□□□□ -2.31
CDX2Q99626 Z83818.1-201ENST00000603584 150 ntBASIC0.59□□□□□ -2.31
CDX2Q99626 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
CDX2Q99626 RNU6-888P-201ENST00000363010 101 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 RNA5SP264-201ENST00000363115 107 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 Y_RNA.121-201ENST00000363309 113 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 Y_RNA.170-201ENST00000363746 110 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 RNU4-84P-201ENST00000364200 139 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 RNU6-654P-201ENST00000364373 107 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 RNU6-442P-201ENST00000383968 104 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 Y_RNA.441-201ENST00000384123 112 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 MIR452-201ENST00000385020 85 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 RNU6-460P-201ENST00000391158 108 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 MIR1185-1-201ENST00000408598 86 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 RNA5SP95-201ENST00000410319 137 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 RNU4-43P-201ENST00000410628 137 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.58□□□□□ -2.32
CDX2Q99626 SNORD116-25-201ENST00000516517 92 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 RNU7-121P-201ENST00000516604 62 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 SNORA74.3-201ENST00000517108 154 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 MIR3144-201ENST00000579460 79 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 MIR548AO-201ENST00000579992 96 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 MIR378D2-201ENST00000580636 98 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 MIR2681-201ENST00000581814 105 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 MIR3668-201ENST00000582138 75 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 AC097639.2-201ENST00000603159 172 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 AC072026.1-201ENST00000605023 201 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 uc_338.6-201ENST00000613544 171 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.58□□□□□ -2.32
CDX2Q99626 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.58□□□□□ -2.32
CDX2Q99626 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.57□□□□□ -2.32
CDX2Q99626 MIR342-201ENST00000362212 99 ntBASIC0.57□□□□□ -2.32
CDX2Q99626 RNU6-103P-201ENST00000363686 107 ntBASIC0.57□□□□□ -2.32
CDX2Q99626 Y_RNA.272-201ENST00000364696 102 ntBASIC0.57□□□□□ -2.32
CDX2Q99626 RNU6-728P-201ENST00000365375 104 ntBASIC0.57□□□□□ -2.32
CDX2Q99626 SNORD116-18-201ENST00000383961 92 ntBASIC0.57□□□□□ -2.32
CDX2Q99626 RNU6-187P-201ENST00000384139 106 ntBASIC0.57□□□□□ -2.32
CDX2Q99626 Y_RNA.506-201ENST00000384494 102 ntBASIC0.57□□□□□ -2.32
CDX2Q99626 MIR605-201ENST00000385078 83 ntBASIC0.57□□□□□ -2.32
CDX2Q99626 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.57□□□□□ -2.32
CDX2Q99626 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.57□□□□□ -2.32
CDX2Q99626 AC015818.7-201ENST00000428754 109 ntBASIC0.57□□□□□ -2.32
CDX2Q99626 AC087499.7-201ENST00000441958 109 ntBASIC0.57□□□□□ -2.32
CDX2Q99626 RNU7-197P-201ENST00000458836 62 ntBASIC0.57□□□□□ -2.32
CDX2Q99626 snoU13.21-201ENST00000459368 105 ntBASIC0.57□□□□□ -2.32
CDX2Q99626 RNU2-13P-201ENST00000515909 113 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms