Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 Y_RNA.629-201ENST00000411368 105 ntBASIC1.51□□□□□ -2.17
SNX18Q96RF0 HMGN1P33-201ENST00000432945 451 ntBASIC1.51□□□□□ -2.17
SNX18Q96RF0 AC027119.1-201ENST00000440877 241 ntBASIC1.51□□□□□ -2.17
SNX18Q96RF0 RNU2-35P-201ENST00000516446 142 ntBASIC1.51□□□□□ -2.17
SNX18Q96RF0 RNU6-250P-201ENST00000516958 103 ntBASIC1.51□□□□□ -2.17
SNX18Q96RF0 MTND5P34-201ENST00000568888 325 ntBASIC1.51□□□□□ -2.17
SNX18Q96RF0 AL020996.3-201ENST00000606617 222 ntBASIC1.51□□□□□ -2.17
SNX18Q96RF0 AL096861.1-201ENST00000610899 123 ntBASIC1.51□□□□□ -2.17
SNX18Q96RF0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
SNX18Q96RF0 MIR4251-201ENST00000635819 61 ntBASIC1.51□□□□□ -2.17
SNX18Q96RF0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SNX18Q96RF0 Y_RNA.273-201ENST00000364703 102 ntBASIC1.5□□□□□ -2.17
SNX18Q96RF0 Y_RNA.346-201ENST00000365385 112 ntBASIC1.5□□□□□ -2.17
SNX18Q96RF0 RNU1-78P-201ENST00000391248 165 ntBASIC1.5□□□□□ -2.17
SNX18Q96RF0 MIR934-201ENST00000401241 83 ntBASIC1.5□□□□□ -2.17
SNX18Q96RF0 RNA5SP144-201ENST00000410846 116 ntBASIC1.5□□□□□ -2.17
SNX18Q96RF0 AC108667.1-201ENST00000428618 249 ntBASIC1.5□□□□□ -2.17
SNX18Q96RF0 snoU13.16-201ENST00000459350 104 ntBASIC1.5□□□□□ -2.17
SNX18Q96RF0 RNU7-123P-201ENST00000515911 60 ntBASIC1.5□□□□□ -2.17
SNX18Q96RF0 MIR3683-201ENST00000580847 82 ntBASIC1.5□□□□□ -2.17
SNX18Q96RF0 MIR4422-201ENST00000581938 83 ntBASIC1.5□□□□□ -2.17
SNX18Q96RF0 MIR3192-201ENST00000584920 77 ntBASIC1.5□□□□□ -2.17
SNX18Q96RF0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SNX18Q96RF0 AL121890.5-201ENST00000620848 304 ntBASIC1.5□□□□□ -2.17
SNX18Q96RF0 RNU6-1319P-201ENST00000390855 104 ntBASIC1.49□□□□□ -2.17
SNX18Q96RF0 RNU6-747P-201ENST00000390928 104 ntBASIC1.49□□□□□ -2.17
SNX18Q96RF0 RNU6-241P-201ENST00000391148 104 ntBASIC1.49□□□□□ -2.17
SNX18Q96RF0 SNORA26.6-201ENST00000391256 115 ntBASIC1.49□□□□□ -2.17
SNX18Q96RF0 RNA5SP136-201ENST00000410906 107 ntBASIC1.49□□□□□ -2.17
SNX18Q96RF0 RNU6-177P-201ENST00000411257 104 ntBASIC1.49□□□□□ -2.17
SNX18Q96RF0 DNAJC19P9-201ENST00000555084 351 ntBASIC1.49□□□□□ -2.17
SNX18Q96RF0 MIR548AO-201ENST00000579992 96 ntBASIC1.49□□□□□ -2.17
SNX18Q96RF0 MIR6717-201ENST00000622747 73 ntBASIC1.49□□□□□ -2.17
SNX18Q96RF0 RNU6-1056P-201ENST00000383996 107 ntBASIC1.48□□□□□ -2.17
SNX18Q96RF0 RNU6-476P-201ENST00000384726 107 ntBASIC1.48□□□□□ -2.17
SNX18Q96RF0 MIR548A3-201ENST00000385297 97 ntBASIC1.48□□□□□ -2.17
SNX18Q96RF0 SNORA17.3-201ENST00000391159 129 ntBASIC1.48□□□□□ -2.17
SNX18Q96RF0 RNU6-1064P-201ENST00000410626 104 ntBASIC1.48□□□□□ -2.17
SNX18Q96RF0 POLR2J4-204ENST00000418424 324 ntBASIC1.48□□□□□ -2.17
SNX18Q96RF0 RPL39P39-201ENST00000455840 151 ntBASIC1.48□□□□□ -2.17
SNX18Q96RF0 RNU6-1053P-201ENST00000515930 101 ntBASIC1.48□□□□□ -2.17
SNX18Q96RF0 AC022523.2-201ENST00000561045 150 ntBASIC1.48□□□□□ -2.17
SNX18Q96RF0 MIR3152-201ENST00000579801 74 ntBASIC1.48□□□□□ -2.17
SNX18Q96RF0 AL670379.3-201ENST00000605040 251 ntBASIC1.48□□□□□ -2.17
SNX18Q96RF0 MIR502-201ENST00000606349 86 ntBASIC1.48□□□□□ -2.17
SNX18Q96RF0 SNORA22.1-201ENST00000362701 134 ntBASIC1.47□□□□□ -2.17
SNX18Q96RF0 Y_RNA.171-201ENST00000363760 102 ntBASIC1.47□□□□□ -2.17
SNX18Q96RF0 SNORA1.1-201ENST00000364671 133 ntBASIC1.47□□□□□ -2.17
SNX18Q96RF0 RNU6-1144P-201ENST00000384247 104 ntBASIC1.47□□□□□ -2.17
SNX18Q96RF0 SNORD20-201ENST00000384550 80 ntBASIC1.47□□□□□ -2.17
SNX18Q96RF0 RNU6-1104P-201ENST00000384723 104 ntBASIC1.47□□□□□ -2.17
SNX18Q96RF0 RNA5SP261-201ENST00000410536 106 ntBASIC1.47□□□□□ -2.17
SNX18Q96RF0 AL022718.1-201ENST00000412004 84 ntBASIC1.47□□□□□ -2.17
SNX18Q96RF0 AC245517.4-201ENST00000448601 281 ntBASIC1.47□□□□□ -2.17
SNX18Q96RF0 AC009474.2-201ENST00000451383 136 ntBASIC1.47□□□□□ -2.17
SNX18Q96RF0 Y_RNA.649-201ENST00000459077 103 ntBASIC1.47□□□□□ -2.17
SNX18Q96RF0 RPL30P7-201ENST00000479312 323 ntBASIC1.47□□□□□ -2.17
SNX18Q96RF0 COX6CP6-201ENST00000490840 228 ntBASIC1.47□□□□□ -2.17
SNX18Q96RF0 RNA5SP445-201ENST00000515889 115 ntBASIC1.47□□□□□ -2.17
SNX18Q96RF0 MIR8055-201ENST00000610739 97 ntBASIC1.47□□□□□ -2.17
SNX18Q96RF0 MIR6129-201ENST00000616087 109 ntBASIC1.47□□□□□ -2.17
SNX18Q96RF0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.47□□□□□ -2.17
SNX18Q96RF0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
SNX18Q96RF0 MIR378A-201ENST00000362177 66 ntBASIC1.46□□□□□ -2.18
SNX18Q96RF0 MIR337-201ENST00000362281 93 ntBASIC1.46□□□□□ -2.18
SNX18Q96RF0 RNU6-834P-201ENST00000362367 110 ntBASIC1.46□□□□□ -2.18
SNX18Q96RF0 SNORA25.3-201ENST00000363205 127 ntBASIC1.46□□□□□ -2.18
SNX18Q96RF0 RNA5SP48-201ENST00000363969 126 ntBASIC1.46□□□□□ -2.18
SNX18Q96RF0 MIR548A1-201ENST00000385041 97 ntBASIC1.46□□□□□ -2.18
SNX18Q96RF0 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.46□□□□□ -2.18
SNX18Q96RF0 AL512326.2-201ENST00000426359 151 ntBASIC1.46□□□□□ -2.18
SNX18Q96RF0 RNU6-1258P-201ENST00000516911 111 ntBASIC1.46□□□□□ -2.18
SNX18Q96RF0 AL512310.8-201ENST00000550183 120 ntBASIC1.46□□□□□ -2.18
SNX18Q96RF0 MIR3664-201ENST00000579074 99 ntBASIC1.46□□□□□ -2.18
SNX18Q96RF0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.46□□□□□ -2.18
SNX18Q96RF0 MIR6841-201ENST00000637129 72 ntBASIC1.46□□□□□ -2.18
SNX18Q96RF0 AL391516.1-201ENST00000554380 2449 ntBASIC1.45□□□□□ -2.18
SNX18Q96RF0 Y_RNA.198-201ENST00000364013 98 ntBASIC1.45□□□□□ -2.18
SNX18Q96RF0 Y_RNA.226-201ENST00000364337 114 ntBASIC1.45□□□□□ -2.18
SNX18Q96RF0 RNU6-1325P-201ENST00000364905 105 ntBASIC1.45□□□□□ -2.18
SNX18Q96RF0 RNU6-429P-201ENST00000384582 108 ntBASIC1.45□□□□□ -2.18
SNX18Q96RF0 MT-TI-201ENST00000387365 69 ntBASIC1.45□□□□□ -2.18
SNX18Q96RF0 RPS3AP1-201ENST00000413190 320 ntBASIC1.45□□□□□ -2.18
SNX18Q96RF0 AC090844.1-201ENST00000422019 156 ntBASIC1.45□□□□□ -2.18
SNX18Q96RF0 RPS27P16-201ENST00000425758 201 ntBASIC1.45□□□□□ -2.18
SNX18Q96RF0 snoU13.25-201ENST00000458945 104 ntBASIC1.45□□□□□ -2.18
SNX18Q96RF0 MIR4498-201ENST00000577599 66 ntBASIC1.45□□□□□ -2.18
SNX18Q96RF0 MIR7974-201ENST00000615835 79 ntBASIC1.45□□□□□ -2.18
SNX18Q96RF0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SNX18Q96RF0 Y_RNA.213-201ENST00000364178 111 ntBASIC1.44□□□□□ -2.18
SNX18Q96RF0 Y_RNA.531-201ENST00000384589 121 ntBASIC1.44□□□□□ -2.18
SNX18Q96RF0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SNX18Q96RF0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.44□□□□□ -2.18
SNX18Q96RF0 RNU7-113P-201ENST00000459273 62 ntBASIC1.44□□□□□ -2.18
SNX18Q96RF0 RNU6-902P-201ENST00000517212 91 ntBASIC1.44□□□□□ -2.18
SNX18Q96RF0 AC004812.1-201ENST00000540773 146 ntBASIC1.44□□□□□ -2.18
SNX18Q96RF0 CYP3A52P-201ENST00000563326 91 ntBASIC1.44□□□□□ -2.18
SNX18Q96RF0 Z97988.1-201ENST00000637697 135 ntBASIC1.44□□□□□ -2.18
SNX18Q96RF0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
SNX18Q96RF0 RNU6-215P-201ENST00000365169 102 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms